Fictibacillus phosphorivorans: ABE65_001230
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Entry
ABE65_001230 CDS
T04282
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
fpn
Fictibacillus phosphorivorans
Brite
KEGG Orthology (KO) [BR:
fpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpn03021
]
ABE65_001230
Transcription machinery [BR:
fpn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABE65_001230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
GerE
HTH_3
Sigma70_ECF
HTH_23
IF2_N
DUF1492
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ANC75557
UniProt:
A0A160IIN5
LinkDB
All DBs
Position
222690..223481
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AA seq
263 aa
AA seq
DB search
MSTESHQRLHSKEQVYAWIDELQQDPKNEEIQTNLVLQYQDLVHSLARKFSKGKSIHDDL
VQVGMIGLLAAFRRYDKTFGRSFESFAVPTIVGEIKRFIRDKTWSVHVPRRIKELGPRIK
KAVEELTTRLQRSPKIFEIAEYLEVSEEEVLETMEMGKSYQALSVDSSIEADQEGSTVTL
LDLVGSNDVGFDQIDKRMLLEKAFAVLSEREREILQCTYFENLSQKETGERLDISQMHVS
RLQRRALEKLKEALRVSPSEALR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagaatctcaccagcgccttcacagtaaagaacaagtctatgcttggattgat
gaactgcagcaagacccaaagaatgaagaaattcagacgaatctcgtgttgcagtatcaa
gacttagttcattcactagctcggaagttttctaaaggcaaaagtattcatgacgattta
gtacaagtcggaatgattggactgcttgctgcttttagaaggtacgacaaaacgtttgga
agatcctttgaatcttttgctgttcccaccatcgtcggggagatcaaacgttttatccgt
gataaaacatggagtgttcacgtacctcgtcgaattaaagaattaggaccaaggatcaag
aaagccgtagaagaactaactacgcgtttacaaagatcaccgaaaatctttgaaatcgca
gagtacctagaagtttctgaagaagaagttctagagacgatggagatgggcaaaagttat
caagctctatccgtagatagttccattgaagcggatcaagaaggaagtacagttacacta
cttgatttagtcggatccaatgatgttggttttgatcagatcgataaaaggatgcttctg
gaaaaagcttttgctgttctttctgaacgcgaacgcgaaattcttcaatgtacctatttt
gagaatttaagccagaaggaaacgggagaacgtttagatatctctcaaatgcatgtgtca
cgacttcaacgacgagcacttgaaaagctaaaagaagcgttgcgcgtatccccttcggag
gctcttagatga
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