Fictibacillus phosphorivorans: ABE65_004525
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Entry
ABE65_004525 CDS
T04282
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
fpn
Fictibacillus phosphorivorans
Pathway
fpn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABE65_004525
09124 Replication and repair
03420 Nucleotide excision repair
ABE65_004525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpn03021
]
ABE65_004525
03036 Chromosome and associated proteins [BR:
fpn03036
]
ABE65_004525
03400 DNA repair and recombination proteins [BR:
fpn03400
]
ABE65_004525
Enzymes [BR:
fpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ABE65_004525
Transcription machinery [BR:
fpn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ABE65_004525
Chromosome and associated proteins [BR:
fpn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ABE65_004525
DNA repair and recombination proteins [BR:
fpn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ABE65_004525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Helicase_C
AAA
Psg1
Motif
Other DBs
NCBI-ProteinID:
ANC76113
UniProt:
A0A160IJ86
LinkDB
All DBs
Position
875767..878058
Genome browser
AA seq
763 aa
AA seq
DB search
MMDAVKISVRSLVEYAYRSGSIDSGFKSTSSLVEGTKAHQTIQKTYEESDFAEVFLQTSY
PYENLEYWIEGRCDGLLLRNDTVTIDEIKSTARNLSEITDETYLVHWAQAKVYAYIYMEK
EDIDRVTVQLTYVHVDSGEQKKFQKEVTFTELEDFMLQLIKTYAPFAELRLSNQQKRNIS
IRDLTFPFPSYRNGQRNFAGAIYKTIVDKKTLFANAPTGTGKTISTLFPAVKAIGEEKAE
KIFYLTAKTLNRKNAEEALLLMKENGLFLQSTTITAKDKVCFKEETRCDPSYCEFADGYF
DRINGAVLDILKNETVMDREVISQYAQKHKVCPFEFSVDLAYASDSVICDYNYVFDPRVS
FKRLFEEQKKRTVLLMDEVHNLVDRARGMYSAEILKSSFLQLARDFKGKHDGVWNTAKAV
NQELLLIKKEHEDKDVAVIELQEKLLESLEAFLIQAEQLLASGDSSEQLLETFFEALQWV
KISQFYDERFVTFISTFKSEVKVRLFCMDPSQLLLQTGKKYGSRIYFSATLSPLSYFREM
LGGEEDDYTIRMPSPYEKEQLDVFVQPLSTRFRDREKTIDPIVGMIKDLVANRPGNYLVF
FPSYRYMTDIYERMLEEDQAFSLIVQHPAMKEEERETFLAHYESVGENSLVGLAVMGGIF
SEGIDLKGDKLTGAVIIGVGLPQVGLERDTMKDYFQRAGKNGYDFAYVYPGMNKVLQAGG
RVIRSEEDRGTLVLVDDRFLTRKYVEMLPEEWRDFVVLDRSFM
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgctgttaaaatctctgttcggtccctagttgaatatgcctaccgttcgggg
agtatcgattctggcttcaagtccacctcatccttagtagaaggaacgaaggctcatcaa
acgatacaaaaaacgtatgaagagagtgatttcgcagaagtatttctccaaacgagctac
ccctacgagaatcttgaatattggatagaaggtcgatgtgatggtcttcttttacgcaat
gataccgttacgatcgatgagatcaaatccactgcgcgaaacttgagtgagataacagac
gaaacatatcttgtccattgggctcaagcgaaagtctatgcttatatatacatggaaaaa
gaagatatagatagagttacggtacagcttacatatgttcatgttgattctggcgagcag
aagaaatttcagaaagaagttacatttacagagcttgaggatttcatgcttcaacttata
aagacgtatgcaccttttgccgagctccgtctatcgaatcagcaaaaaaggaatatcagt
atacgagaccttacttttccgttcccgtcctatcgcaatggccagcgtaactttgctggt
gctatctataaaacgatcgtggataagaagacgttgtttgcaaacgcaccgacagggaca
gggaaaaccatctccactctgtttccagccgtcaaagcgataggtgaagagaaggcagaa
aagattttttatttaacagccaaaacactgaaccgaaagaatgcagaagaagcacttttg
ttgatgaaagaaaacggcttgtttctacaaagcacgaccatcacggctaaagacaaagtc
tgttttaaagaagagacgcgttgtgacccatcgtattgtgagtttgccgatggatatttt
gacagaataaatggagcggttcttgatatcttgaaaaatgagacggtgatggatcgggaa
gtcatctcgcaatacgctcaaaagcacaaagtttgtccgttcgagttctctgtagatctt
gcttatgcatcagacagtgtaatctgtgattacaattatgtcttcgatccgagagtctcg
ttcaaacgattatttgaagagcaaaagaagcgtacggttcttcttatggatgaagtgcat
aatcttgtagacagagcacgcggcatgtattcagcagagatactgaaatcttcattctta
caactcgcacgtgattttaaggggaagcatgatggggtttggaatacggcaaaagccgtt
aaccaggaacttcttttgataaaaaaagaacatgaagataaagatgttgctgtcattgaa
ttgcaggaaaaactacttgagagtctagaagctttcttaatacaggcagagcagctatta
gcaagtggtgatagcagcgaacaactattagagactttttttgaagcgctgcaatgggta
aagatttcacagttttatgatgaacgtttcgtaaccttcatctccacgtttaaaagtgaa
gtcaaagtgcgtctgttctgtatggatccttctcaacttcttttacaaacaggtaaaaaa
tatggctcacgtatttatttttcagcaacactctcaccgctttcttactttcgcgagatg
cttggaggagaggaagacgattacaccatccggatgccttctccttatgaaaaagaacag
ctagatgtgtttgttcagcccttgtctacgcgttttagagaccgggagaaaacaatagat
ccgattgtgggtatgatcaaagacttggtcgcaaacagacccggaaactatcttgttttc
tttccatcttatcgctatatgacagatatctatgaacgaatgttagaagaagatcaagcc
ttttcccttatcgttcagcatcctgctatgaaagaagaagagcgggaaacctttttagct
cattatgaatctgtaggtgagaactctcttgttgggctagcggtcatgggcggcatcttt
tctgaaggaattgatctaaaaggagataagctgaccggtgctgtcatcattggtgttggt
ttgcctcaagtagggttagaacgcgatacgatgaaagattactttcagcgagcaggcaag
aatggttacgatttcgcatacgtgtatcctggaatgaataaagtactgcaggcaggtgga
cgtgtgattcggtcagaagaggatcgaggtacactcgttttagtcgatgaccgttttcta
acaagaaagtacgtggagatgctgcctgaagagtggcgggattttgttgtgttggaccgc
tcgtttatgtag
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