Fictibacillus phosphorivorans: ABE65_009020
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Entry
ABE65_009020 CDS
T04282
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fpn
Fictibacillus phosphorivorans
Pathway
fpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE65_009020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpn03019
]
ABE65_009020
Messenger RNA biogenesis [BR:
fpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABE65_009020
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4252
Exonuc_VII_L
DUF2844
KH_2
Motif
Other DBs
NCBI-ProteinID:
ANC76936
UniProt:
A0A160ILZ9
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All DBs
Position
1758504..1760069
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AA seq
521 aa
AA seq
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MPSLAVFISSLLVSLGVGAIVGYLVRKSIAEAKISSAERAAAQIVEDAKRDADASKKEAL
LEAKDEIHKLRTEAEREIRERRNELQKQEHRLVQKEEILDRKSETLDKKEESLERREESL
TKKQRQIEEIESKVEELLEEQQRELERISSITRDEARQIIMTETENEMTHELAMMVKEME
NRAKEEADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRREIARMALDKLVQDGRIHPARIEEMVEKSRREVDEYI
REVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSTEVAYLAGLMAAEVGEDVH
LARRAGLLHDIGKAIDHEVEGSHVDIGVELATKYKEHPVVINSIASHHGDTEATSIIATL
VAAADALSAARPGARRETLETYIRRLEKLEEISESFDGVEKSFAIQAGREIRIMVKPDMI
DDVASYRLARDITKKIESELDYPGHIKVTVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtttagcagtattcatctccagtttgcttgtctcactaggtgtcggtgctatt
gtcggatatcttgttaggaaatcaattgctgaagcgaagatttcaagcgcagaacgagca
gctgcgcaaattgttgaagatgcaaagcgcgatgctgacgccagcaagaaagaagcgctg
ttagaagcaaaagatgaaatccataagctacgtaccgaagctgaacgcgaaattcgcgaa
cgtcgaaacgagcttcaaaaacaagaacatcgattggttcaaaaagaagagatcctagac
agaaaaagtgaaactcttgacaaaaaagaggaatctttagagcgacgtgaggagtctctc
accaaaaaacagcgacaaattgaagagattgaaagcaaagtggaggaattgctagaagaa
caacagcgagagcttgagcgcatttccagcattaccagggatgaagcccgccaaattatc
atgactgaaactgagaacgagatgacacatgagttggcgatgatggtaaaagagatggag
aaccgcgcgaaagaagaagcggacaagaaagcaaaagaaattctttccctagctatccaa
cgctgtgcagccgatcacgtagcagaaacgacagtttctgtagtaaaccttcctaacgat
gaaatgaaaggaagaattattggacgtgaaggacgaaacatcaggacgttagaaacgtta
actggaattgacttaattattgatgatactccagaagccgttattctgtctggttttgac
ccgatccgccgtgaaattgcacgtatggctttggacaagcttgtacaggatggaagaatt
caccctgcacgaattgaagagatggttgaaaaatcacgtcgagaagtggatgagtatatc
cgcgaagtaggagaacaaacaacatttgaagttggcgttcacggacttcaccctgatttg
atcaagattcttgggcgtttgaagtatcgtacaagctacggtcagaacgtactgaaacat
tcaacagaagtggcttacctagctggcttaatggcagcagaggtaggagaagacgttcat
cttgcaagacgagctggattgcttcatgatatcggtaaggcgattgatcatgaagtagaa
ggcagtcacgtagatattggtgttgaacttgctacgaagtacaaagagcacccagtagta
atcaacagcattgcgtctcaccatggagacactgaagcaacttcaatcattgcaactcta
gttgcagctgcagatgcactttctgctgctagaccaggagcacgccgtgaaacacttgaa
acgtatatccgcagacttgaaaagttagaagagatttcggaatcatttgatggtgttgaa
aaatcttttgcgatccaagcaggtcgtgagatacgtatcatggttaaaccggatatgatt
gatgatgtagcatcataccgactagcacgtgatattacgaaaaagattgaaagtgaactg
gattatccaggacacattaaagtgacagtcattcgtgagactcgagcagttgaatacgca
aaataa
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