Fictibacillus phosphorivorans: ABE65_009310
Help
Entry
ABE65_009310 CDS
T04282
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fpn
Fictibacillus phosphorivorans
Pathway
fpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE65_009310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpn03019
]
ABE65_009310
03009 Ribosome biogenesis [BR:
fpn03009
]
ABE65_009310
Enzymes [BR:
fpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABE65_009310
Messenger RNA biogenesis [BR:
fpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABE65_009310
Ribosome biogenesis [BR:
fpn03009
]
Prokaryotic type
rRNA helicases
ABE65_009310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
UTP25_NTPase-like
NDK
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANC76990
UniProt:
A0A160IMN4
LinkDB
All DBs
Position
1815476..1817014
Genome browser
AA seq
512 aa
AA seq
DB search
MTTFQELGLSPELLQSINNMGFEEATPIQRDTIPTALKGTDLIGQAQTGTGKTAAFGIPL
IEKMDTRSRFVQGIVLAPTRELAVQVAEELNKIGQFKGIKTLPIYGGQSIVRQIKALKNG
PHIVVGTPGRVQDHINRKTLKLESVHTVVLDEADEMLNMGFVEDIEKILENVPTERHTML
FSATMPKQIQNLAAKFMKDVLLIKVKASEMTVKNIEQEYVEVKERQKFDALCRFMDIHSP
ELAIVFGRTKRRVDELSEALSKRGYSAEGIHGDLPQAKRDKVLRAFKNNTIEVLVATDVA
ARGLDISGVSHVYNFDIPQDPESYVHRIGRTGRAGKTGYALTFITPREIDHLYTIEKITK
RKMVKRAIPSVSEAMEGQQQITLEKLMEVVEQDNFNGYKQTAVELLEENDSVTLLAAALK
LLTKEPDTTPINLTDEPPLSVKKRRPNNRFSDRRRSGGGPKREGGGGRDNRRSGYSKGER
SGSRDGGNRSSSGSRDQSYRSQKRVREDFKNR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcaagaactaggactaagtcctgagttgcttcaatccattaataacatg
ggatttgaggaagcaacaccgattcagcgtgataccattccaacagcacttaaggggact
gaccttattggccaagcacaaacagggactggtaagacagctgcgtttggtataccgcta
atcgaaaaaatggatactagatcacgattcgtacaaggaatcgtattagctccaactcgt
gagttagctgttcaagtagcagaagagctcaataaaatcggtcaattcaaaggaattaaa
acattgccgatttacggtggacaatccattgttcgacaaatcaaagcattaaaaaatggt
ccacacatcgtagtaggtacaccaggacgtgtgcaagaccacatcaatagaaaaacattg
aagcttgaaagtgttcatacggttgtccttgatgaagcggatgaaatgcttaacatggga
ttcgttgaagatatcgaaaagatcttagaaaacgttccaacagaacgtcacacgatgctt
ttctctgcaacaatgcctaagcagatccaaaacttggcagcaaaattcatgaaggacgta
ttgcttatcaaagtaaaagcgtctgaaatgacagtaaagaacatcgaacaagaatatgtt
gaagtaaaagagcgtcaaaagtttgatgcgctttgccgcttcatggatattcactctcca
gagcttgcgatcgttttcggacgtacgaagcgccgtgtagatgaattgtctgaagcatta
agcaaacgtggatattcagctgaaggaattcacggtgaccttccgcaagcaaaacgtgac
aaagtgttacgtgcgttcaaaaacaacacgatcgaagttcttgttgcaacagacgtagct
gctcgtggacttgacatctcaggtgtatcacacgtttataacttcgatattcctcaagat
ccagaaagctatgttcaccgtattggacgtactgggcgtgcaggaaaaacaggttatgca
ttaacgtttatcacgccgcgtgaaatcgatcacttatatacgatcgaaaaaattacaaag
cgtaaaatggtaaaacgtgcgattccttccgtatcagaagcaatggaaggacaacaacag
atcacgcttgaaaagttgatggaagtggttgagcaagataactttaacggttataagcaa
acagcagttgagttactagaagagaacgattctgtaacactcttagctgcagcgcttaag
cttcttacaaaagaacctgatacgactccgatcaatcttacagatgagccgccactatca
gttaaaaagagacgtcctaataaccgtttctctgatcgtagacgttctggaggaggccct
aaaagagagggtggaggcggaagagataatcgccgttctggatattctaaaggcgaacgc
agtggttctcgcgatggtggaaaccgtagcagcagcggcagccgtgatcaatcataccgt
tcacaaaaacgtgttcgtgaggattttaaaaacagataa
DBGET
integrated database retrieval system
