Fictibacillus phosphorivorans: ABE65_015455
Help
Entry
ABE65_015455 CDS
T04282
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fpn
Fictibacillus phosphorivorans
Pathway
fpn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABE65_015455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpn03400
]
ABE65_015455
Enzymes [BR:
fpn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ABE65_015455
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABE65_015455
DNA repair and recombination proteins [BR:
fpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABE65_015455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_IS1595
Ribosomal_S13
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ANC78118
UniProt:
A0A160INZ7
LinkDB
All DBs
Position
complement(2994527..2995348)
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVENVKNTLNRFLPGKMITDVKIYWENIIKHPGTEEFILKLKGQTFQSVYRRGKF
LIFHLDEDVLVSHLRMEGKYGLNQKDEPADKHTHVIFQFSDGTELRYRDVRKFGTMHLYP
KGTEESHAPLKTLGIEPLSDSLTAALLKKLFANRKRNIKSVLLDQTLIAGLGNIYVDEVL
FQAGIHPETSANKLSQPRLKKLKTAITEILSESVKHGGSSIRSYTNAVGETGGYQLKLFV
YGRKNEACRVCGTEIERLVVAGRGTHICKTCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttacctgaggtcgaaaatgtcaaaaacactttgaatcgatttcttccagga
aagatgattacagatgtgaaaatatactgggaaaatattattaaacatcctgggacagaa
gaattcattttgaaactaaaaggtcaaacctttcaaagtgtgtatcgaagaggtaagttt
ttaatttttcatcttgatgaggatgtattagtttctcacctaaggatggaagggaaatat
gggttgaatcaaaaagatgaacctgctgataaacatacacatgttatttttcagttctct
gatggaaccgaactaagatatcgagatgtgagaaaatttgggacgatgcatctgtatcca
aaaggaacagaagaaagtcatgcaccattgaaaactttaggtatagaaccattatcagat
tctttaacagctgcactcttaaaaaagctgtttgctaatcgaaaacgtaacataaaatcg
gtattgttagatcagactcttattgctggtttaggcaacatttatgtcgatgaagtatta
tttcaggctggaatccatccagagacctcagcaaataaattaagtcagccccggttaaag
aaattgaaaaccgccattacagaaattctttctgagtctgtgaaacacgggggaagctcg
atccgctcttacacgaacgcggttggtgagacaggtggctatcagctgaaactatttgtt
tacggtcgaaaaaatgaagcatgtcgtgtatgtggtaccgagattgaacgattagttgta
gcaggtagaggcactcatatttgtaagacttgtcaaaaataa
DBGET
integrated database retrieval system
