Fictibacillus phosphorivorans: ABE65_020765
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Entry
ABE65_020765 CDS
T04282
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fpn
Fictibacillus phosphorivorans
Pathway
fpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE65_020765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpn03019
]
ABE65_020765
03009 Ribosome biogenesis [BR:
fpn03009
]
ABE65_020765
Enzymes [BR:
fpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABE65_020765
Messenger RNA biogenesis [BR:
fpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABE65_020765
Ribosome biogenesis [BR:
fpn03009
]
Prokaryotic type
rRNA helicases
ABE65_020765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CbiQ
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
ANC79104
UniProt:
A0A160IRH7
LinkDB
All DBs
Position
complement(4101069..4102184)
Genome browser
AA seq
371 aa
AA seq
DB search
MGFKELGIHDELIDILLQNGIGEPTPIQKETIPVILEGKDVVGQAQTGTGKTLAFVLPLL
QKVDAERDAVQGLIVAPTRELAIQITAEVRKLTEALGEINVLAVYGGQDVIAQMHKLEGK
VHVVVATPGRLLDHIRRETIDLSHVSTFVLDEADQMLHIGFLDDIEDIMYEVPEDRQTLL
FSATMPDEVKKLAETYTNDPQDIHVKTKQITLKEIRQRIVETTDRGKQNDLVQTIRLLRP
YLAIIFCRTKRRASKLNEALQNMGYNSDELHGDLSQAKREDVMRRFREGEIQFLVATDVA
ARGLDVDGVTHVFNYDIALDAESYIHRIGRTGRAGGKGLAVTFVAQKDRRLLQVIERETD
QKLNVLKLEYM
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaaagaattagggattcatgatgaattgatagatattttgcttcaaaacgga
atcggtgaacctacacctattcaaaaggaaacgattcctgtcatcttagagggtaaggat
gttgtgggacaagctcaaacgggtacgggaaagacacttgctttcgtgcttcctcttctg
caaaaagttgatgctgaacgggatgcggttcaagggttgatcgtcgcaccgacgcgtgag
cttgccattcagatcacagctgaagtacgcaaacttacagaagctctcggtgagatcaac
gtgctcgctgtttacggtgggcaggatgtgatcgcgcagatgcacaagctagagggcaag
gtacatgttgttgtcgcaacacctggaagactgcttgatcatattcgacgagagacgatc
gacttatctcatgtttcaacgttcgtgctagatgaagcggatcagatgcttcatatcgga
tttttagatgatatagaagacatcatgtatgaggtgcctgaagatcgccaaacgttactt
ttttccgcgacgatgcctgatgaagtgaaaaagctggctgaaacgtataccaatgatcct
caagatattcatgtgaaaacgaaacagattacattaaaagaaattcgccagcgaatcgtg
gaaacaacagatcgagggaagcagaacgatctcgttcaaacgatcagactgctgcgtccg
tatttagcgattattttttgccgaacgaaaagaagagccagcaagttgaacgaagcgctg
caaaatatgggttataactctgatgaactgcatggcgatctttctcaagcgaagcgagag
gacgtgatgcgacgctttcgtgaaggggagattcagtttttagtagctacggatgtagca
gcacgcggtcttgatgttgacggtgtaacacatgtatttaattacgacatcgcgctcgat
gcagaaagctatattcatcgaatcggaagaacgggacgtgctggaggaaaaggactcgcg
gtgacgttcgttgctcagaaagaccgacgtttgctacaggtgatcgaaagagagacagat
caaaagttaaacgtgttaaaacttgaatatatgtaa
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