Flavobacterium psychrophilum FPG3: FPG3_00890
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Entry
FPG3_00890 CDS
T03296
Name
(GenBank) ATP-dependent helicase
Organism
fpo
Flavobacterium psychrophilum FPG3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_12
PDDEXK_1
AAA_11
Cas_Cas4
DUF7067
Motif
Other DBs
NCBI-ProteinID:
AIN73095
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All DBs
Position
complement(204269..207427)
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AA seq
1052 aa
AA seq
DB search
MKTPAFSIYNASAGSGKTYTLVKEYLKIILKAKHNDAYKNILAITFTNKAVFEMKTRIID
SLFDFSKDNPTEKSIQLMNDLGKEINLNQSQIKTKAQSIIKNIIHNYAAFDISTIDKFTH
KVIRAFAFDLGLPITFDVSLDTENLLQEAVDAIVAQAGEDQVLTKLLVDFTMEKTDDDKS
WDISSEIMNTGRLVLNENYREEILSLKDKTIPEFIALKAKLEETCKSLENQNINLANEAV
LLIDSQGIDTKSFSRETFPNHLGFIQRSELKPTHKKFRTVDDIAVNKNAKDKDIIEGIAN
ELIFILYKVYKNYEKKDFYQAFLKNITPLSLLNTVSNELAKIQEDQNILSISEFNKLIFE
HIQNQPAPFIYERLGEKYKHFFIDEFQDTSEMQWQNLIPLIDNALSSEDLQGIQGSLMIV
GDPKQSIYRWRGGKAEQFIDLAKTKNPFSNKDKEVFNLETNYRSFEAVIDFNNDFFKFLS
QKFSNEDYKDLYENYSFQKSNAKKGGYVNISFIPEIDTDFVSEEDEENIDKNDIYLTTTL
QTIIKVAAEGFLYNEIVLLTRNNKHGILLANYLTENDIPVISSESLLINASSEVKFILNM
LRYLNDKNDIESLANGLYYLDQNLENNIETHDFIYQGIQYKDEIELEKWLANSGIQLSFQ
NSRRKSLYEIAELIAAKCINSENNNAYVQYFLDIVLERDVKYQMGISDFLEYWDKNGHKL
SIPSAEGSNAIRIMTIHKSKGLEFPVVIFPFVEENYSAPKREKMWIDSQSDDLDFDKFLI
DKSSKVKEYGENAASVYNQKSQEDLLDNINVLYVALTRAEEQLFIISNSKKRNSKGELPN
NSASFFIEFLEDYKNFDSNILNYEFGNCKRISKQKPLEAKRKNIEAINSVINPNAIKIAQ
RESLMWGTHQQEAIEFGNVLHEILSFVQTKKDIPLALKKALETGLISENQQEEVAKTVIE
IVFHPELNDFFHENSKVYNEQSIIKKGLQTIKPDRVTISGQNAYLLDYKTGKHQSKYENQ
LKEYELALIEMGFNVQKKSLIYIGENLEIVHL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacccgcattctctatatacaacgcatcagctggctcaggaaaaacctacaca
ttggtcaaagaatacctaaaaattattctaaaagccaaacacaacgatgcgtacaagaac
attctcgccataacctttaccaacaaagcggttttcgaaatgaaaaccagaattatagac
agccttttcgatttttctaaagacaatcccacagaaaaatcaatccaattaatgaatgat
ttaggcaaggaaattaatcttaatcaatctcaaatcaaaaccaaagcacagtctataata
aaaaacatcattcataattatgccgctttcgacatttcgactatcgataaatttacacat
aaagttattcgtgcctttgccttcgatttgggtttgcccattacttttgatgtttcctta
gacaccgaaaatctcctacaagaagccgtagatgcaatcgtagcacaagcaggcgaagac
caagtactcaccaaactactcgtcgattttaccatggaaaaaaccgacgatgacaaatcc
tgggacatttcgagcgaaatcatgaacacaggaagactcgtgcttaacgaaaattatcga
gaagaaattttgtcgctcaaagacaaaaccattccagaatttattgcccttaaagcaaaa
ttagaagaaacttgcaaatcgttagaaaaccaaaacatcaatctggcaaacgaagccgta
cttcttatagacagtcaaggaattgacactaaatccttttctagagaaacttttccaaat
catttgggatttattcaaagaagcgaactaaaaccaacgcataaaaaatttagaactgtc
gatgatattgccgtcaataaaaacgcaaaagacaaagacattattgaaggcattgccaat
gaactcatttttattttatacaaagtttataaaaattacgaaaaaaaggatttttatcaa
gcttttctaaaaaatatcacgccactttcgttactaaataccgtaagtaacgagttggca
aaaattcaggaagaccaaaacattttgtctatttccgaatttaataaactcattttcgag
cacattcaaaaccaacccgcaccgtttatttacgaacgattgggcgaaaaatacaaacat
ttttttatcgatgagtttcaagacacgtccgaaatgcaatggcaaaacctgattccgtta
atagataatgccctatcgagcgaagatttacaaggaattcaaggttcgcttatgattgtg
ggcgatcccaaacagtctatttaccgttggcgtggcggaaaagccgaacaatttatcgat
ttagccaaaaccaaaaacccctttagtaataaagacaaagaagtttttaatctagaaaca
aattatcgaagttttgaagccgtaatcgactttaacaatgatttttttaagtttttatca
caaaaattttctaatgaagattacaaagatttgtatgaaaattatagctttcaaaaatcg
aatgctaaaaaaggaggctatgtaaacatttcttttattccagaaatagataccgacttt
gtttcggaagaagacgaagaaaacatcgataaaaatgatatttacctcacaactactttg
caaaccattataaaagtagctgcagaaggttttttgtataacgaaattgtattgctcacc
agaaataacaaacacggtattttattagcaaattacttgaccgaaaacgacattcctgtt
atttcatccgaaagtttattaataaacgcttcatcggaagtaaagtttatcctaaatatg
cttcggtatttaaatgataaaaacgatatcgaatcgttagccaatggcttgtattatttg
gatcaaaatttagaaaataatatagaaacccacgattttatttaccaaggaattcagtac
aaagacgaaatcgaattagaaaaatggttggcaaattccgggatacagctctcgtttcaa
aatagcagaagaaaatcattgtacgaaattgcagagctcattgcagcaaaatgcattaat
tctgaaaacaacaatgcttatgtacaatatttcttagatattgtgctcgagcgtgatgta
aaataccaaatgggcatttcagatttcttagaatattgggacaaaaacgggcataaactc
agtattccgtcagccgaaggatctaatgccattcggataatgaccatccacaaatcgaaa
ggattagaatttcctgtagttatttttccttttgtagaagagaattatagtgcacccaaa
cgagaaaaaatgtggatcgattcccagtctgacgatttagatttcgacaaatttttaatt
gacaaatccagtaaagtaaaagaatatggcgaaaatgcagcttcggtttacaaccagaaa
tcgcaagaggatttattagacaatatcaatgttttatatgtagcgctaacccgtgccgaa
gaacaactatttattatttcgaatagtaaaaagaggaatagtaaaggagaattacccaat
aattctgcctccttttttatagaatttttagaagattacaagaactttgattcgaatatt
ttgaattacgagtttggcaattgcaaaagaatttctaaacaaaaaccattagaagccaaa
cgtaaaaatattgaagctataaattcagtcatcaatccaaatgctataaaaattgcacaa
cgggaatcactcatgtggggaacgcatcagcaggaagctatcgaatttggtaatgtttta
catgaaattctatcattcgttcaaactaaaaaagacattccattagccctaaaaaaagca
ttagaaacgggacttatctcagagaatcagcaagaagaagtcgcaaaaacagttattgag
attgtttttcacccagaattaaatgatttttttcatgaaaacagtaaggtatataacgaa
caatctatcataaagaaaggcttgcaaactataaaaccagaccgagttactatttccgga
caaaatgcttatttattagattacaaaacaggaaagcaccaatctaaatacgaaaaccaa
ctaaaagaatacgaattggcgctaatagaaatgggatttaatgtacagaaaaaatcactc
atatatataggagagaatttagaaatagtacatttgtaa
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