Flavobacterium psychrophilum FPG3: FPG3_04670
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Entry
FPG3_04670 CDS
T03296
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fpo
Flavobacterium psychrophilum FPG3
Brite
KEGG Orthology (KO) [BR:
fpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpo03016
]
FPG3_04670
Enzymes [BR:
fpo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FPG3_04670
Transfer RNA biogenesis [BR:
fpo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FPG3_04670
Prokaryotic type
FPG3_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIN73727
LinkDB
All DBs
Position
complement(1027590..1028342)
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AA seq
250 aa
AA seq
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MRYFIEFAYNGTQYHGWQYQPNATSVQETLNKVFSTLLQEKIDIMGAGRTDAGVHAKQMY
GHFDTDISIDNAKFIHKANSFLPKDIVIFNIIPVHNQAHARFDATSRTYNYHISTYKNVF
TNNLAWYSSKKIDVIAMNEAAKVLLKFTDFKCFSKTNTDVNTYNCKITEAFWSIEKEQLI
FTITADRFLRNMVRAIVGTLINIGLHKITIENFIQIIESQNRENAGFSVPAHGLFLTNIE
YPYIKKDESI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttatagaatttgcttataacggaacacaatatcatggctggcaataccaa
cctaatgcgacatcagtacaagaaactttaaacaaagttttttcgacactactacaagaa
aaaatagatattatgggtgctggccgtactgatgctggtgtgcatgccaaacaaatgtat
ggtcattttgatactgatattagtatcgataatgcaaaatttattcacaaagccaattca
tttttaccaaaagacattgtgatttttaatataattcccgttcacaatcaagcccatgcc
agatttgatgctacttcacgaacatacaactatcatatttcgacttacaaaaatgttttt
actaataatttagcttggtattcatcaaagaaaatagatgtcattgccatgaatgaagcg
gcaaaagtattattaaaatttaccgattttaaatgtttttcgaaaacaaatacagatgta
aatacttataactgcaagataaccgaagcattttggagcatcgaaaaagagcaactcatc
tttaccatcacggccgacagatttttaagaaatatggtacgtgccattgtaggaacactc
ataaatattggtttacacaaaataacaatcgaaaattttatacaaataatcgaatctcag
aacagagaaaacgcagggttttcggttccagcacatggtttatttctcacaaatatcgaa
tacccgtatataaaaaaagatgaaagcatttga
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