Flavobacterium psychrophilum FPG3: FPG3_08475
Help
Entry
FPG3_08475 CDS
T03296
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fpo
Flavobacterium psychrophilum FPG3
Pathway
fpo03030
DNA replication
fpo03430
Mismatch repair
fpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPG3_08475
03430 Mismatch repair
FPG3_08475
03440 Homologous recombination
FPG3_08475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpo03032
]
FPG3_08475
03400 DNA repair and recombination proteins [BR:
fpo03400
]
FPG3_08475
Enzymes [BR:
fpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPG3_08475
DNA replication proteins [BR:
fpo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPG3_08475
DNA repair and recombination proteins [BR:
fpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPG3_08475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
RNase_H_2
DNA_pol_A_exo1
DUF7508
DUF2430
Motif
Other DBs
NCBI-ProteinID:
AIN74326
LinkDB
All DBs
Position
complement(1840573..1841934)
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQFNEEGITEIAIYKFDGHQIVDQFISLVNPEIPIQPFVVKLTGINNAM
LVSAPKFHEVAKRIVEITKDCIIVAHNTVFDYRILRTEFSRLGYDFQAKTLCTVELAKIL
IPEQPSYSLGKLVRALGIPMTNRHRAEGDALATVKLFKMLLDKDLEKIIVKEQIKTEITK
GIAPKLLNIIESLPNKTGVYYIHKENGTIIFIGKSRNIKKRVNQHFTGITKSALKIQQEV
FTVTYQETGSELIALLKETEEIKRNRPIYNRISPKTHFPVAIYCEKDANGYLNLKLQKFD
GRKKEITAYTSLQEGKNNLFRITSQYNLCQKLTGLYETKTHCFQQKINECDGACIGKITP
QEYNKRVQEFITKSTLENQSIIIIDSGRTTREHSAVLIENGVYKGYAFFDLNYQISNIQI
LKNLITPMPNNRDTRNIIQGYLRKNKVMKIMKF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaatactagacatagaaacaacaggaggacaattcaatgaagaaggaattacc
gaaatcgccatctataaatttgatggtcatcaaatagtagaccaatttattagtttagta
aatcctgaaatcccaattcaaccgtttgtagtaaaacttacgggaataaataatgctatg
ttggtttctgcacccaagtttcacgaagtagccaaacgcattgtagaaatcacaaaagat
tgtataattgttgcacacaataccgttttcgattaccgaattcttcgcacagaatttagc
cgtctaggttacgattttcaagcaaaaacgctatgcacagtcgaactagctaaaatacta
attccagaacaaccctcatatagcttaggaaaattagttcgagcactaggaatcccaatg
actaacagacatcgtgccgaaggagatgcactagcaacagtcaaattatttaaaatgctg
ttagacaaagatttggaaaaaatcattgtaaaagagcaaattaaaaccgaaattaccaaa
ggaattgcaccaaaattattaaatattatcgaatccctgcccaacaaaacaggcgtttac
tacattcacaaagaaaacggaactattatttttattggcaaaagcagaaatatcaaaaaa
agagtaaaccagcattttacaggaatcacaaaaagtgccctaaaaatacaacaagaagtt
tttaccgttacttaccaagaaactggaagcgaactcatagcgctactaaaagaaaccgaa
gaaataaaaagaaaccgacctatttataacagaatatcgcctaaaacccatttcccagta
gccatatattgcgaaaaagatgccaatgggtatttgaatctaaaattacaaaaattcgac
ggtcgaaaaaaagaaatcacagcctacacaagccttcaggaaggaaaaaataatttattc
agaataacatcacaatacaatttgtgccaaaaattaactggtttatacgaaacaaaaact
cactgttttcagcaaaaaataaacgaatgcgatggcgcttgtataggcaaaattacgccc
caagaatacaacaaacgagtgcaagaatttattacaaaaagcaccctcgaaaaccaaagc
atcatcattatagacagcggtagaaccaccagagaacacagtgctgttctcatagaaaat
ggtgtatataaaggctatgcttttttcgatttaaattatcaaattagcaatatacaaata
ctaaaaaacctcattacaccaatgcccaacaaccgtgacacccgaaatatcatacaaggc
tatttacgtaaaaacaaagtgatgaaaatcatgaaattttaa
DBGET
integrated database retrieval system
