KEGG   Fusarium poae: FPOAC1_000864
Entry
FPOAC1_000864     CDS       T09519                                 
Symbol
YSH1
Name
(RefSeq) endoribonuclease ysh1
  KO
K14403  cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
fpoa  Fusarium poae
Pathway
fpoa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fpoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    FPOAC1_000864 (YSH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fpoa03021]
    FPOAC1_000864 (YSH1)
   03019 Messenger RNA biogenesis [BR:fpoa03019]
    FPOAC1_000864 (YSH1)
Transcription machinery [BR:fpoa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     FPOAC1_000864 (YSH1)
Messenger RNA biogenesis [BR:fpoa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     FPOAC1_000864 (YSH1)
    U7-dependent histone pre-mRNA processing factors
     FPOAC1_000864 (YSH1)
SSDB
Motif
Pfam: CPSF73-100_C Beta-Casp Lactamase_B_6 Lactamase_B Anti-Pycsar_Apyc1 RMMBL Lactamase_B_2 Lactamase_B_3
Other DBs
NCBI-GeneID: 68335867
NCBI-ProteinID: XP_044711389
LinkDB
Position
1:complement(<2627961..>2630851)
AA seq 832 aa
MASKRKAAAMNATAAEEPVDPSDELMFLCLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAY
DGLAALPFYDDFDLSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHPTKAIYKWLI
QDSVRVGNTSSNPTTQPVYTEQDHLNTFPQIEAIDYHTTHTISSIRITPYPAGHVLGAAM
FLIEIAGLNIFFTGDYSREQDRHLVSAEVPKGVKIDVLITESTYGIASHVPRLEREQALM
KSITSILNRGGRVLMPVFALGRAQELLLILDEYWGKHADFQKYPIYYASNLARKCMLIYQ
TYVGAMNDNIKRLFRERMAEAEASGDGAGKGGPWDFKYIRSLKNLDRFDDVGGCVMLASP
GMLQNGVSRELLERWAPSEKNGVIITGYSVEGTMAKQIMQEPDQIQAVMSRSMAGARRMP
GGDGEKVLIPRRCSVQEYSFAAHVDGVENREFIEEVQAPVVILVHGEQHNMMRLKSKLLS
LNANKTTKVKVYSPRNCEELRIPFKADKTAKVVGKLASIQPPQSIHPDQTATPPLVTGVL
VQNDFKLSLMAPEDLREYAGLNTTTITCKQRLTLSAAGVDLVKWALEGTFGNIEELPEMR
RAKNGHNGHADKMITDGDEAKQEDADEEVASLVAAYLVMGCVSVRYRTNGEVELEWEGNM
LNDGIADSVMAVLFSVESSPAAVKRSSAKHSHSHDLPEVNLHHSATPEERLERLLWFLEA
QFGQDNVAPVTIPKLPTLEGADDKLKKGGEDEDAMKVEEDGEDAQLQERQQKEIERLHKI
GIPVPGVSIKVDKMSATVWLEDLEVESSHKVFADRVRAVVERAIEVTAPLWG
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggcatccaaacgaaaggctgccgctatgaacgcgaccgctgccgaagaaccagtagat
ccgtcggatgagcttatgtttctttgcctaggaggaggaaacgaagtcgggaggtcatgc
cacatcatccagtacaaaggaaagacagtcatgcttgatgccggtcaacatcctgcgtat
gatggactcgctgcattgcctttctacgatgactttgatttgagtactgtcgacgtgctc
ctcatcagccatttccatattgaccatgcggcatcgttaccatacgttctcgccaagacc
aacttcaggggccgtgttttcatgacacatcccacaaaggctatctacaaatggcttatc
caagacagtgtccgagttggcaacacttcgtccaatcctaccacacagcctgtttacact
gaacaagaccatctaaacacgttccctcagatcgaggctatcgactaccacaccacacac
accatctcctccatcagaatcaccccttacccagctggccatgtcctcggtgccgccatg
tttctcattgagattgctggtctcaacatttttttcacaggtgactactcgcgcgaacaa
gatcgacatcttgtctcggcagaagttcccaagggtgtcaaaattgacgttcttatcacc
gagtcaacatatggtattgcctctcatgttcctcgtttggaaagagaacaggctctcatg
aaatcgatcacaagtatcctcaacaggggtggtcgagtgcttatgccagtctttgctttg
ggacgagcccaagagctgcttttgattcttgatgaatattgggggaagcatgccgacttc
cagaagtaccctatctactatgctagcaatcttgcgaggaaatgtatgctcatctaccaa
acatatgtcggtgccatgaacgacaatatcaagcgtctcttccgagagcgcatggccgag
gccgaggcatcgggtgatggcgcaggtaagggcggaccatgggattttaagtatatccgc
tcgctcaaaaacctggacaggttcgacgatgtaggcggttgtgttatgcttgctagcccc
ggtatgcttcagaacggtgtcagccgtgaattactggaaagatgggcgcccagcgagaag
aacggcgttattattactggttacagtgtggaaggcactatggccaagcagattatgcag
gagcctgaccaaatccaggctgttatgtcccgcagtatggctggtgctcggcgtatgcct
ggcggcgatggtgagaaggttcttattccccgacgatgcagtgtccaggaatactcgttc
gctgctcatgttgatggcgtcgagaaccgagaatttatcgaggaggtacaagcaccagtt
gttattcttgttcatggagagcagcacaacatgatgcgtctcaagtccaagctcctgtca
ctcaacgccaataaaaccactaaagtcaaggtttactcccctcgcaattgtgaggaacta
cgcatcccctttaaagccgacaagacggccaaggttgtaggaaagcttgcctctattcag
ccccctcagagcattcaccccgaccagaccgccacgccgcctcttgtcactggtgtgctt
gtgcagaatgattttaagctatctctcatggcacccgaagatctccgcgagtacgcaggc
ctcaatactaccactatcacctgtaaacagcgccttactctcagtgctgcgggtgttgac
ctcgtcaagtgggctctagagggtacctttggcaatatcgaggaacttcctgaaatgcgc
cgtgcaaagaatggccataatggacatgcggataagatgattacggatggcgacgaagcg
aagcaagaggatgcagatgaagaggttgccagccttgttgcggcttacttggttatgggt
tgtgtttcagtccggtatcgaacaaatggtgaagtggagcttgaatgggagggcaacatg
cttaacgacggcatcgccgactctgtcatggcggttcttttctccgtcgagagctctccc
gctgccgtcaagcgctcatccgcaaaacactcacactcacacgacctcccagaagtaaac
cttcaccattccgccacccctgaggaacgtcttgagcgtctcctgtggttcctcgaagcc
cagttcggccaagacaatgtcgcccctgttaccattcctaagctgcctacgttggaaggc
gcagacgacaaactcaagaagggcggcgaagatgaagacgccatgaaggtagaggaggat
ggcgaagacgcacaactccaggagagacagcagaaggaaattgagcgattgcacaagatt
ggtatcccagttcccggagtatctatcaaagtcgataagatgtctgctacagtatggttg
gaggacctcgaggtggagtcaagccataaggtatttgctgaccgagtgagagctgttgtg
gagagggctatcgaggtgacagcacctctttggggttaa

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