Fusarium poae: FPOAC1_001014
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Entry
FPOAC1_001014 CDS
T09519
Symbol
YTH1
Name
(RefSeq) RNA-binding component of cleavage and polyadenylation factor
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
fpoa
Fusarium poae
Pathway
fpoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FPOAC1_001014 (YTH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpoa03021
]
FPOAC1_001014 (YTH1)
03019 Messenger RNA biogenesis [BR:
fpoa03019
]
FPOAC1_001014 (YTH1)
Transcription machinery [BR:
fpoa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FPOAC1_001014 (YTH1)
Messenger RNA biogenesis [BR:
fpoa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FPOAC1_001014 (YTH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
GRP
Motif
Other DBs
NCBI-GeneID:
68336017
NCBI-ProteinID:
XP_044711537
LinkDB
All DBs
Position
1:3110018..3110776
Genome browser
AA seq
252 aa
AA seq
DB search
MPSAVESPASAILNHSATTYNFRFSPFLRQTYQVGLSPDRPVCKAFQSGHCPNGTRCPER
HVSDSKTSQPTGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGD
ECLYLHIDPQSRLPPCPHYDMGFCPLGPNCSKKHVRKKLCVFYLAGFCPDGPDCKEGAHP
KWSKDLEKPTLKSEEKKDEETRMEFPQDDMDRQRDQQRDRDRDDGGRHRGGHGGHGGRGK
WRGRGRYRARGH
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgccgtcgaatctccagcctctgccatcctcaatcactctgcgacgacctac
aacttccgcttctcacccttcctccgacaaacctatcaggtcggcctctcccccgaccgg
ccagtatgcaaagctttccagtcaggtcattgcccgaacggcacgcgatgccctgaacga
cacgtctccgactccaagacatcacaaccgactggtggtctcaactcgctagtgtgcaag
cattggttgcgtggcctatgtaaaaagggagagcactgcgagtttcttcacgagtacaac
ctacgaaagatgcctgagtgtaattttttcatgcgaaatggatactgctctaatggcgac
gagtgtctctatcttcacattgatcctcaaagtcgactgccgccttgtccccactacgat
atgggcttctgtcctctcggccccaactgctcgaagaagcacgtgcgtaagaagctctgt
gtcttttatctagctggtttctgccctgatgggccggattgcaaggagggcgctcatccc
aagtggtcaaaggatctggagaagccaactctcaagtcggaagaaaagaaggacgaggag
acgagaatggaatttcctcaggatgatatggaccgacagcgtgaccaacaaagagacaga
gaccgggatgatggaggaagacatcgaggaggtcacggtggtcacggtggcagagggaaa
tggcgaggaaggggtagatatcgtgcaaggggtcactaa
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