Fusarium poae: FPOAC1_003493
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Entry
FPOAC1_003493 CDS
T09519
Symbol
CDC28
Name
(RefSeq) Cyclin-dependent kinase catalytic subunit
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
fpoa
Fusarium poae
Pathway
fpoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPOAC1_003493 (CDC28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpoa03041
]
FPOAC1_003493 (CDC28)
Enzymes [BR:
fpoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPOAC1_003493 (CDC28)
Spliceosome [BR:
fpoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
FPOAC1_003493 (CDC28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
nSTAND_NTPase5
AAA_19
T2SSE
AAA_30
nSTAND3
SRP54
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
68338496
NCBI-ProteinID:
XP_044713974
LinkDB
All DBs
Position
1:complement(<10765281..>10768319)
Genome browser
AA seq
1012 aa
AA seq
DB search
MASKRYALLPMEVDEVGPQKVTKEKKSRHRHRERDRDDKSSSRRSKSRRERSRSRSPTRE
SSSRHSRPKQYRRRDDKADFDDRWGDEEPPSDEPEEEDDEPEFEQSPSKRVKLSHNASRD
EEMSDGAKEELERKKDIEEREAFAKRLREKDSKKSKKDDRDDVSSSRRRLAEDAEARNQA
LPDIRERSRQEYLKKRETERLALLRKQVAEETAELRSGVRLSEKEKAEFAKNREILRLAE
ERLKIDDHRDGYAMPEDYITEKGKLDRKKKEEALYKRYVEKDEFGQEKFVTEHEEWEREQ
ASKAKAQIQRAERENDDYDYVMDDSQYIQWNLDSRMAGDDRKLTKEQQFLEAQIDAAEKK
ALSIEETRKSLPIYQYRDEFLAALEQYQVLVIVGETGSGKTTQLPQYLHEAGYTKNGMKV
GCTQPRRVAAMSVAARVSEEVGVKVGNEVGYTIRFEDCTSDKTVLKYMTDGMLLREFMTE
PDLAGYSALMIDEAHERTVHTDILLALIKDLARERPDLKLLISSATMNAEKFAQYFDDAP
IFNIPGRRYPVDIYYTPSPEANYLAAAITTTFQIHTTQPKGDILIFLTGQDEIEAAELEI
AETAKKLGNRVKELVVCPIYANLPSELQSKIFEPTPDGARKVVLATNIAETSLTIDGIVY
VIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKFAYMNEMD
ESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQALNHRGEL
TKLGRQMGEFPTDPMLAKAVLAADKEGCVEEVLSIVSMLGEASALFFRPKDKKIHADSAR
NRFTVKDGGDHITLLNVWNQWVDSDFSPVWAKENFLQQRSLTRARDVRDQLAKLCERVEV
APSTCGATNLRPIKRAITAGFFPNAARLQKSGDSYRTVKNNTTVWIHPSSVLMAIDPPEK
MVVYFELVQTTKEYMRSVMPIEPRWLSELAPHFHKKKDVEEMEEKKMPKQRS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaaaggtacgctctccttcccatggaagtggatgaggtaggtcctcagaaa
gttaccaaggagaagaaatccaggcaccgacatcgcgaacgagaccgcgacgacaagtca
tcttcccgccgctcaaagtcccgtcgcgaacgcagtcgctcgagatccccaactcgagaa
tcttcatctcgccatagtcgacccaaacaatatcgacgacgcgacgacaaggccgatttt
gatgatcggtggggcgacgaggagccaccttctgatgaaccagaggaggaagacgatgag
cccgagtttgagcaatcaccaagcaagcgagtcaagctcagccataatgcatcacgagac
gaagaaatgtccgatggcgcgaaagaagaattggaacgcaaaaaggatattgaagagcgc
gaggctttcgcaaagcgtttgagagaaaaggacagcaaaaagtcgaaaaaggacgacaga
gacgatgtatcctcatcgagaagaagactcgccgaagacgctgaagcgcgaaaccaagcg
ctgcccgatattcgagaacgatcacgacaggaatacctcaagaaacgagagaccgaacga
ttagcccttctgcgcaagcaggtcgcagaggaaactgctgaattacgaagcggtgtgcga
ctgtcggaaaaagaaaaggcagagtttgccaagaacagagagatcttgcgactggctgag
gagcgcctcaagatcgacgatcacagggatggatatgctatgccagaggattacatcaca
gagaagggcaaactcgaccgaaagaaaaaggaggaagcactatataaacgatacgtcgag
aaagacgaatttggacaggagaaattcgttactgagcatgaggagtgggaacgagagcag
gcctcaaaggccaaggcgcagattcagcgcgccgagagagagaacgatgattacgactat
gttatggacgattcccagtatatccagtggaacttggattcacgtatggctggagatgat
cggaaattgaccaaggaacaacaattcctcgaggcgcaaatcgacgcagctgaaaagaag
gctctgtcaattgaagagacaaggaaaagtctacccatttaccaataccgagacgagttt
cttgctgctctggagcagtaccaggttctagttattgtcggagagaccggtagtggaaag
acgacccaactaccgcagtacctccacgaggctggttacaccaagaacggcatgaaggtt
gggtgtacccagccccgacgagtggcagccatgagtgtagcagctcgtgtgtctgaagaa
gtcggtgtcaaagttggaaacgaagttggatacactattcgttttgaagactgcacaagc
gataagactgtcctcaagtacatgactgatggcatgttgctacgagaattcatgacggaa
ccggatctggcagggtactcggcgctgatgatcgacgaagcccacgaacgcacagtccat
actgatattctattggctttgatcaaggatcttgcgagagaacgacccgatctaaaacta
ttgatttcttcagctaccatgaacgctgaaaagtttgcgcagtactttgacgatgcacct
atctttaatattcctggtcgacgatatcctgtcgatatctattacactcctagccccgaa
gctaactacctggctgccgctattacgacgactttccagatccataccacacaacccaag
ggcgacattctgatcttcttgacaggtcaagacgagatcgaagcagccgagctcgaaatt
gcagaaacagcaaagaagctcggcaatcgcgttaaagaacttgttgtttgtcccatctat
gccaacttgccttctgaattacagtccaagattttcgagcccacaccagacggtgctcgc
aaggttgtgctggctaccaacattgctgaaaccagtttgacgattgatggcattgtttat
gtcattgacccaggctatgtcaaggaaaacgtctacaaccccgcgacaggcatgtctaac
ttggttgtcgttccctgttcgagagcctctgccaatcagcgaagtggtcgagctggtcgt
gtcggaccaggaaaatgtttccgtttgtataccaagttcgcatacatgaacgagatggac
gagtcgaccacgccggaaatccaaaggacaaacctgaatggagttgtgcttcagttgaag
tctcttggtattaatgaattgctcgatttcgagtttatggatcctccacccacagaagct
ctcattggtgctctgaaccaactgtttgctctgcaggcgttgaatcatcgcggagagttg
accaagcttgggcgacagatgggtgagtttcctacagaccccatgcttgccaaggctgta
cttgctgcagacaaggaaggatgtgttgaggaggttttgtctattgtatccatgcttggt
gaagcatctgccctcttcttccggcccaaggacaagaagatccatgcagatagcgcccga
aaccgattcacagtcaaggacggcggcgatcacattacgctcctcaatgtgtggaaccaa
tgggtcgacagtgatttctccccagtttgggccaaggagaacttcttgcagcaacgctct
ctcacacgcgcacgcgacgtccgcgaccaactagcaaagctctgtgaacgtgtcgaggtg
gcaccatccacatgcggcgccacgaacctacgacccatcaagcgcgccatcacagccggc
ttcttccccaatgccgcacggctccagaagagtggtgatagctacaggacggtcaagaat
aatacgactgtgtggatccatccgagtagtgtactcatggctatcgatccgcccgagaaa
atggtggtttattttgagttggtacagacgactaaggagtatatgcgtagtgtgatgccg
attgagcctagatggctatcagagttggcgccgcactttcacaaaaagaaggatgttgag
gagatggaggagaagaaaatgccaaagcagagatcataa
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