Fusarium poae: FPOAC1_005090
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Entry
FPOAC1_005090 CDS
T09519
Symbol
LSM7
Name
(RefSeq) Sm-like protein lsm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
fpoa
Fusarium poae
Pathway
fpoa03018
RNA degradation
fpoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPOAC1_005090 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
FPOAC1_005090 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpoa03019
]
FPOAC1_005090 (LSM7)
03041 Spliceosome [BR:
fpoa03041
]
FPOAC1_005090 (LSM7)
Messenger RNA biogenesis [BR:
fpoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FPOAC1_005090 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
FPOAC1_005090 (LSM7)
Spliceosome [BR:
fpoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FPOAC1_005090 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
TraI-like_C
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
68340093
NCBI-ProteinID:
XP_044708331
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All DBs
Position
2:complement(3632853..3633396)
Genome browser
AA seq
132 aa
AA seq
DB search
MSDRPSHRGGRGQGSHPRGGRGGGRGGGGAGGAQQERERPKKENILDLAKYMDKQITVKF
NGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVRGTLLVLVSPVDGSE
EIANPFVQTEDD
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagaccctcacaccgaggtggccgcggccaaggatcgcatcctcgaggtggc
cgcggaggaggtcgcggaggaggcggcgcgggaggtgctcaacaggagcgcgagaggcct
aagaaggagaacatccttgacctggccaaatacatggataagcagatcacggtcaagttc
aacggtggccgtgaggtcaagggcacgctgaagggctatgacgctctcatgaacctggtt
ctcgatgatgtacatgaggttgttcgagatgacgaaggcaacgagtctactcgatcccta
ggccttgtggttgtacgaggcaccctccttgtccttgttagccccgtcgacggcagtgaa
gaaattgccaacccctttgttcaaacggaggatgattga
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