Fusarium poae: FPOAC1_006853
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Entry
FPOAC1_006853 CDS
T09519
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
fpoa
Fusarium poae
Pathway
fpoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FPOAC1_006853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpoa03021
]
FPOAC1_006853
03019 Messenger RNA biogenesis [BR:
fpoa03019
]
FPOAC1_006853
Transcription machinery [BR:
fpoa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FPOAC1_006853
Messenger RNA biogenesis [BR:
fpoa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
FPOAC1_006853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
VHS
zf_PCFS4
Hepar_II_III_N
Motif
Other DBs
NCBI-GeneID:
68341856
NCBI-ProteinID:
XP_044710038
LinkDB
All DBs
Position
2:8369497..8371424
Genome browser
AA seq
599 aa
AA seq
DB search
MSGDSAEVAEDYRLALEDLSSNLRFEISNLTVIARENTEHALAIAEVLQQHILKAAPSKK
LPALYVLDSIVKNVGTPYTLYFGLNLFKTFMESYAVVDQPVRRKMEEMLRTWKEPVPGSM
DSRPVFSHRLVQPIENALLKARAATMSQPGMMPGRPRSAVPHRDTPTPPGMRFPPGHPAQ
QYTSNGGQSLSNDIRNLIAAMQAEASRNPHDHGVQTRLRALHDLQVVVNTNSLPPDQLEL
IKNKVTELAAVNMMAPLTQRPAPTPPVPVQARPIPMPPVSVALPQPVAPAPAQEVVTLDA
LLGKGALAALMARQSATPQNSTPTPQPPPVQHEPPMPPMSTMTAMPAMSMPAMPIPTMSA
TSTPVPPVAAAAAAAAAPWSLLDQLRKSGLLPPTLASVPAPVQQGGINLAALKQPYQPSL
IRQLHNDLGQPCTQCGRRFRDDEAGKKKKIAHMDWHFRVHQRTNEAEKRGMHRSWYVDQG
EWLKSREVVDVDHVPTAEDVAAQASKASEAAKPKYIPVPDPSRGINPVCPICQDRFENKW
LDTAQEWVWLDTVLVGNRAYHASCHAEATRDRENTPVLGKRKAETSIASPKVRSLKTSA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagactctgctgaggtcgcggaggactatcgcctcgcgctggaggacctatcc
tctaatttgcgcttcgagattagcaacttgactgtgattgctcgcgagaatactgaacat
gctctagcgatcgcggaagtcttgcagcagcacatccttaaggctgccccaagcaagaag
ctcccagctctgtacgtactagactcgatcgtcaagaatgttggcactccatacacgctc
tacttcggtctcaatcttttcaaaacctttatggaatcatacgctgtagtcgatcaacct
gtgcgtcggaagatggaagagatgcttagaacatggaaggagcctgttcctggatctatg
gacagcagacctgtcttttctcacaggttggtgcaacccattgagaatgcactcttgaag
gcacgcgccgctaccatgtcccaaccgggcatgatgcctgggcgaccgcgatctgctgtg
ccccatcgtgataccccgacaccgcctggaatgagattcccaccaggccatccagctcaa
caatacacatcaaatggaggacagtcattgagcaatgacattcggaacctaattgctgcc
atgcaggcggaagcctcaaggaacccacatgatcatggtgttcagactagattaagagca
ctccatgacctgcaggtcgttgtgaacaccaatagcttgcccccggatcagcttgagctc
attaagaacaaagtaactgaacttgctgccgtaaacatgatggcgcctctgactcaaagg
cctgcgcctactcctcctgtgcctgttcaagcacgccctatcccaatgcctccagtgtcc
gtagctcttcctcagcctgtagctccggctccggcgcaagaagttgtgacgcttgacgcg
ctcttgggtaagggagcgttggcagcactgatggcaaggcagtcggccactcctcaaaac
tcgacacctactccgcagccaccccccgttcaacatgaaccaccgatgccaccaatgtct
acaatgactgcgatgccagccatgagtatgccagctatgcctataccaacaatgtcagca
acatctacaccagtgccgccagtagcagcagcagcagcagcagcagcagcaccatggagt
cttctcgatcaactacgaaagtccggtttactcccacctacacttgcatctgtacctgca
ccagttcaacaaggcggcatcaacttggctgctctaaagcaaccgtaccaaccttctctg
atccgacaactacacaacgacttgggccagccatgcactcaatgtggcagacggttccga
gatgacgaggctggcaagaagaagaagattgcccatatggactggcatttccgtgtccat
caacgaaccaacgaagccgagaagcgaggcatgcatcgcagttggtacgttgaccaaggc
gaatggctaaagtcaagagaggtcgtcgacgtagaccacgtcccaaccgccgaggacgtt
gccgcgcaggcctccaaagcatctgaggccgctaagccaaagtacattcccgtccccgac
ccttctcgtggcatcaaccccgtttgtccgatttgccaagatcgtttcgagaacaaatgg
ctcgacactgcacaggaatgggtatggttggatacagttttggtcggtaaccgagcgtac
catgcttcgtgtcacgcagaagcaacacgagatcgcgagaatacaccagtgctgggtaaa
aggaaagcggaaacaagcattgcgtcacccaaagtccgatccctcaagacgtcagcttaa
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