Fusarium poae: FPOAC1_009475
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Entry
FPOAC1_009475 CDS
T09519
Symbol
PRP43
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase prp43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fpoa
Fusarium poae
Pathway
fpoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPOAC1_009475 (PRP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpoa03041
]
FPOAC1_009475 (PRP43)
03009 Ribosome biogenesis [BR:
fpoa03009
]
FPOAC1_009475 (PRP43)
Enzymes [BR:
fpoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPOAC1_009475 (PRP43)
Spliceosome [BR:
fpoa03041
]
Complex A
U2 snRNP components
U2 related factors
FPOAC1_009475 (PRP43)
Complex B
FPOAC1_009475 (PRP43)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FPOAC1_009475 (PRP43)
Ribosome biogenesis [BR:
fpoa03009
]
Eukaryotic type
90S particles
Helicases
FPOAC1_009475 (PRP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
NB-ARC
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
68344478
NCBI-ProteinID:
XP_044706571
LinkDB
All DBs
Position
3:6214575..6216970
Genome browser
AA seq
768 aa
AA seq
DB search
MSEYMGGKRSSADADESTRKKAKKEGGGDEKYNPYLAHMHDNGDSNGYGEEPSPDSPLAG
MKRQKTTAKQAAKAEDSESNPFTGRPHSQKYFQILQSRRDLPVHKQRQEFLDKYHSTQIL
VFVGETGSGKTTQIPQYVVYDELPHLTGKLIACTQPRRVAAMSVAQRVADEMDVTLGEEV
GYSIRFEDMTGPNTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMALLK
QISMRRPDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIR
TVLQIHASEPEGDVLLFLTGEDEIEDACRKISLEADELMREVDAGPLAVYPLYGTLPPHQ
QQRIFDKAPAPLRKGGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVES
LLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELK
KLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSMASAFPLDPALAVML
ISSPEFYCSNEILSITSLLSVPQIFTRPANNRKRADEMKAQFAHPDGDHLTLLNAYHAFK
GQATSDPNSAKQWCHEHFLSFRHLSSADNVRAQLKRIMETHGLELVSTPFEDKNYYTNIR
RALLAGFFMQVAMKESSGKLYRTVKDDQAVLIHPSTVLRTEFDWVLYNEFVLTSKQYIRT
CTGIRPEWLLEIAPTYYDIDSFEQGDVKRSLARAAEKKRRKEAMKAGR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatatatgggaggaaagcggtcaagcgccgatgccgacgagtcaactcgaaag
aaggccaagaaagaaggcggcggcgacgaaaagtacaacccttaccttgctcacatgcat
gacaacggggatagcaatggctatggcgaggagccttcccccgactctcctttggccggc
atgaagcgacagaaaacaaccgctaagcaggcagccaaggctgaggattcagagtcgaac
cccttcaccggccgaccacattcgcagaagtacttccagatcctccagagccgtcgcgat
ttacccgtgcacaagcaacggcaggagtttctcgataagtaccattcgacgcagatcctc
gtcttcgtcggtgagacaggttccggaaagaccactcagatcccccaatatgtcgtttac
gacgagctacctcacctcaccggtaagctcatcgcttgtacccagccgcgtcgagtcgcc
gccatgtcggtcgcgcagcgtgtcgctgatgagatggacgtcaccttgggtgaggaggtc
ggttacagcattcgttttgaggatatgacaggccccaataccatgctcaaatacatgacc
gacggtatgcttctgcgcgaagccatgcacgaccacgagatgtctcgctacagctgcatt
attctcgatgaggctcacgaacgtacccttgcgaccgatatcctcatggccttgctcaag
cagatctccatgcgccgccccgaccttaagatcattattatgtctgccactcttgacgcc
caaaagttccaaaagtacttcaacgacgcgcctctgctcgctgttcctggtcgaacccac
cctgtcgagatcttctatacaccagagcctgagcgcgattacgttgaggctgccataaga
actgttctccaaatccacgcttctgagcctgagggtgatgttttgctcttcttgactggt
gaagacgagattgaggacgcttgtcgcaagatcagcctggaggctgatgagctaatgcgc
gaggttgacgctggtcctcttgccgtgtaccctctttatggtactctacctcctcaccag
cagcagcgcatcttcgacaaggctcctgctcctcttcgcaaaggcggtcgtcctggacgt
aaggtcatcatttctaccaacatcgccgaaaccagtttgaccattgacggtatcgtgtac
gtcgtggaccccggtttcagcaagcagaagatttacaaccctcgtatccgtgtcgagtct
cttttggtttcgcccatctccaaggcctctgcccagcagcgtgctggtcgtgctggtcgt
acaaagcctggaaaatgtttccgcctttacacagagaaggcgtttaagaaggaactgatc
gagcagacataccctgagattctgcgctccaaccttgccaacacagttttggagctcaag
aagctcggtgtcgaggatcttgtccattttgatcttatggaccctcctgctcctgagact
atgatgcgagctcttgaagagctcaactatctcgcctgtctcgacgatgatggtgagctg
accactctcggcagcatggcatcagcgttccctctggaccccgccctggctgtcatgctc
atctcttctcctgagttttactgctccaacgagattctttccatcacttctctgctctca
gttcctcaaatcttcactcgccctgccaacaaccgcaagcgcgctgatgagatgaaggcg
caatttgctcaccccgatggagaccacctgaccctgctcaacgcctaccacgccttcaag
ggccaggccacatcagaccccaacagcgccaaacagtggtgtcacgagcacttcctctcg
ttccgtcatctttccagtgctgacaacgtgcgcgcccagcttaagcgcatcatggaaaca
catggtctcgagcttgtctcaacgccatttgaggacaagaactattacaccaacatccga
cgcgcgctactcgctggttttttcatgcaggtcgctatgaaggagagttctggcaagctc
tatcgcactgtcaaggatgatcaggctgtcttgatccacccctcaaccgttcttcgcacc
gagtttgactgggttctttacaacgaatttgtcctgacgtcaaagcaatacatccgtaca
tgtacaggtatccgacccgagtggctactggagattgcccccacctactatgacatcgat
agctttgagcaaggcgacgtcaagcgctctcttgcccgcgctgcagagaagaagcgccgc
aaggaggccatgaaggctggtagatga
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