Fusarium poae: FPOAC1_009557
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Entry
FPOAC1_009557 CDS
T09519
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
fpoa
Fusarium poae
Pathway
fpoa03013
Nucleocytoplasmic transport
fpoa03015
mRNA surveillance pathway
fpoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPOAC1_009557
09122 Translation
03013 Nucleocytoplasmic transport
FPOAC1_009557
03015 mRNA surveillance pathway
FPOAC1_009557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpoa03019
]
FPOAC1_009557
03041 Spliceosome [BR:
fpoa03041
]
FPOAC1_009557
Messenger RNA biogenesis [BR:
fpoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FPOAC1_009557
TREX complex
FPOAC1_009557
Spliceosome [BR:
fpoa03041
]
Complex C
Other components
EJC/TREX
FPOAC1_009557
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FPOAC1_009557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_PARP14_3
RRM_occluded
Peptidase_M35
Motif
Other DBs
NCBI-GeneID:
68344560
NCBI-ProteinID:
XP_044706652
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All DBs
Position
3:6474091..6475816
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AA seq
252 aa
AA seq
DB search
MSGKLDQSLDDITQAQRRGARRRSNPRRSAGRPAAAAPIGGIQKNTKPARGSGAKPVPAK
AAPNKDSKIIVSNLPKDVSEQQIKDYFIQSVGPIKRVELVYGPNSQSRGVANVTFHKSDG
ASNAFQKLNGLLVDNRPIKIEIVVGAAQADKVIPAAKTLAERTTQPKAQAKAQPKSAAAD
KHTAGAAKGAAKGAANKKRRGRNSRPAKKTQEELDSEMADYFVAPAPEAVGNTAAPAAAP
AATADADMDEIA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaagctcgaccaatctcttgacgacatcacccaggcccagcgccgtggtgct
cgccgtcgttccaacccccgccgctctgctggacgcccagccgcggccgctcctattggt
ggtatccagaaaaacaccaagcccgcacgcggttctggcgcaaagcccgtcccggccaag
gccgctcccaacaaggacagcaagatcatcgtgagcaatctgcctaaggacgtctcggag
cagcagattaaggactatttcatccagtctgttggacctatcaagcgagtagagcttgtc
tacggccccaactcacaaagtcgcggtgtcgccaacgtcactttccacaagtccgatggc
gctagcaatgccttccagaagctgaatggtcttcttgtcgacaaccgaccaatcaagatt
gagattgttgtcggggccgctcaggctgacaaggtcattcctgccgccaagaccctcgct
gagcgtactacccagcccaaggcccaggccaaggctcagcccaagtccgctgctgctgac
aagcacaccgctggtgcggccaagggagcggccaagggagctgccaacaagaagcgccgt
ggtcgcaacagccgtcctgcaaagaagactcaagaggaactcgactcagagatggctgac
tattttgtcgcccctgcccctgaggctgttggcaacactgctgctcctgctgccgcacct
gctgccactgccgatgctgatatggatgagattgcttaa
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