Fusarium poae: FPOAC1_010590
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Entry
FPOAC1_010590 CDS
T09519
Symbol
PRP28
Name
(RefSeq) mRNA splicing protein prp28
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
fpoa
Fusarium poae
Pathway
fpoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPOAC1_010590 (PRP28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpoa03041
]
FPOAC1_010590 (PRP28)
Enzymes [BR:
fpoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPOAC1_010590 (PRP28)
Spliceosome [BR:
fpoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
FPOAC1_010590 (PRP28)
Complex C
U5 SnRNP specific factors
FPOAC1_010590 (PRP28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2986
P-loop_SecA
PRAI
Motif
Other DBs
NCBI-GeneID:
68345593
NCBI-ProteinID:
XP_044702292
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All DBs
Position
4:1503994..1506153
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AA seq
719 aa
AA seq
DB search
MPLDIEELLRKKKAADTAAAKPRFIPKAERERLAAEKAKKEEDDKKRKASEDEQKRKEEE
QKWRSNGSSRPNESNGSGRVPTGPRSMNDGRDDRERDRDQGRGRGRGKDKKGDKQGVSAD
KQSAEDIEATLLRSRYLGPQVNQQSNFSAKKKRMRTTEKKFNFEWDADEDTSRDNDPLYD
RQTAVSHSGSFAGIGGEFDDEAEERARKRAKMIQQRDPENGRERAEGIMEDFFRARDKAR
QRADRRGLGKHWSEKSLDDMRERDWRIFKEDFGIATKGGMIPNPMRSWQESNLPKRLLNI
VDDVGYKEPSPIQRAAIPIAMQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEINKH
DGPYALIMAPTRELVQQIETEARKFAGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATP
GRLLDCIERRLLVLSQCCYVIMDEADRMIDLGFEESVNKILDALPVTNEKPDTDEAENAQ
IMQRYLGDKDRYRQTMMYTATMPPLVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVS
GEDRRKKRLQEILSSGAFGPPIIVFVNIKRNCDAVARDIKQMGWSAVTLHGSKTQEQREA
ALASVRAGHTQVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAI
TFLGPEDTETMYDLKQILSKSSISKVPEELRRHEAAQSKPVRGAKKDKDEGSGKGNWQH
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgacatcgaagaactattacgcaaaaagaaggcagctgataccgccgccgcg
aaacctcgattcatcccaaaggctgaacgagagcgactagcagctgagaaagcaaagaag
gaagaggacgacaaaaagcgcaaagcttccgaagacgagcagaagcgaaaagaagaagaa
caaaaatggagatcaaatggatcatcaaggcctaacgaatcgaacggatcggggcgcgtg
cctacaggtccgaggtccatgaacgacggccgggatgatcgagaacgcgatcgcgaccaa
ggacggggacgaggcagaggaaaagataaaaaaggagataagcagggcgtgagcgccgat
aaacagtcagcagaagacattgaagctactcttctacggtctcgataccttggtccacaa
gtgaatcagcaatccaacttctctgcgaagaagaagcgcatgcgaacaacggaaaagaag
ttcaacttcgaatgggatgcagatgaagatacctctcgcgacaacgatccgctatacgac
cggcaaaccgctgttagccatagcggatcattcgctggtattggcggcgaattcgacgat
gaggccgaggaacgagcgcgcaaacgggcgaaaatgattcaacagagagatccagagaat
ggaagggagagagccgagggtatcatggaggactttttccgagcacgcgacaaggcaagg
caacgagcggatcgaagaggactgggcaagcactggtctgaaaagtctctggacgacatg
cgagaacgagattggcgcatcttcaaggaggactttggtattgctaccaagggcggcatg
atccccaaccccatgcgtagttggcaggagtcgaatctgccgaaacgcttactcaacatt
gttgatgatgtcggatataaggagccctcaccaattcaacgagccgctatccctatcgcc
atgcaagcccgcgaccttatcggtgtagccgtcactggttccggaaagaccgctgcgttc
cttctaccactacttgtttacatctctgatctgccacccctggatgaaatcaacaaacac
gacggtccttatgctctcatcatggcacccactcgagaactggtccagcaaattgagacc
gaagctaggaaattcgcaggacctcttgggttccgcgtggtgagcattgttggtggtcat
caaattgaagaacaagcatacaatctgcgtgacggtgctgaaattgtcgtcgctacgcca
ggtcgtctgcttgattgtattgagcgtcgactactcgttctctcacaatgttgctacgtt
attatggatgaagcagatcgtatgatcgatcttggtttcgaagaatccgttaacaagatc
ctcgatgcactaccagttaccaacgagaaaccagacacagatgaagctgagaatgcacaa
atcatgcagcgctacctgggcgacaaggatcgttacaggcagaccatgatgtacacagcc
accatgccacctcttgtagagaggattgcaaagaaatatctacggcgcccagccattgtc
accattggtaacgcaggcgaagccgtcgacacagttgagcagcgcgtcgagttcgtttca
ggcgaagatcgtcgcaagaagcgactccaagagattctatcctcgggtgcctttgggccc
cctatcattgttttcgtcaacatcaagcgcaactgtgacgctgttgctagagacatcaag
caaatgggatggtctgccgtcacattgcacggctcaaagacccaggaacagcgagaagct
gccctcgcctctgtccgcgctggccacacacaagttctcgtcgcaaccgaccttgcaggt
cgtggtatcgacgtgcccgacgtttctctcgtcgtcaacttcaacatggccacgaacatt
gagagttacacccatcgtatcggtcgtacaggccgtgctggaaagagtggtgtggccatt
acattccttggccctgaagatactgaaaccatgtatgatctcaagcagattttgagcaag
agctcgatctcaaaggtccccgaagaattgaggaggcacgaggctgcccagtccaaacca
gtacgtggtgctaagaaagacaaggacgaaggatctggaaaggggaactggcagcactaa
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