Fusarium poae: FPOAC1_011021
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Entry
FPOAC1_011021 CDS
T09519
Symbol
RSE1
Name
(RefSeq) pre-mRNA-splicing factor rse1
KO
K12830
splicing factor 3B subunit 3
Organism
fpoa
Fusarium poae
Pathway
fpoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPOAC1_011021 (RSE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpoa03021
]
FPOAC1_011021 (RSE1)
03041 Spliceosome [BR:
fpoa03041
]
FPOAC1_011021 (RSE1)
03036 Chromosome and associated proteins [BR:
fpoa03036
]
FPOAC1_011021 (RSE1)
Transcription machinery [BR:
fpoa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
FPOAC1_011021 (RSE1)
Spliceosome [BR:
fpoa03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
FPOAC1_011021 (RSE1)
Complex B
FPOAC1_011021 (RSE1)
Complex C
U2 SnRNP specific factors
FPOAC1_011021 (RSE1)
Chromosome and associated proteins [BR:
fpoa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
FPOAC1_011021 (RSE1)
TFTC complex
FPOAC1_011021 (RSE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
68346024
NCBI-ProteinID:
XP_044702721
LinkDB
All DBs
Position
4:3015204..3019206
Genome browser
AA seq
1212 aa
AA seq
DB search
MATTSNMFLYSLTVQPPTNVTQAVLGQFAGTREQLIITGAGSQLSLLRPDPSQGKVITLL
SHDVFGIIRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFQRLHLETFGKSGVRR
VIPGEYLACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALD
VGYSNPVFAALEIDYSEVDQDSTGQAMEELDTQLVYYELDLGLNHVVRKWSDPVDPTASI
LFQVPGGNDGPSGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKL
KGNTGAFFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSG
FLYVATQFGNYSFYQFEKLGDDDEELEFYSDDFPVDPKASYEPVYFHPRPTENLALVESI
PAMNPLLDCKVANLTGEDAPQLYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWT
LKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHP
KGIRHIRNGNVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKE
MFGTVTCLSLGDVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAI
IAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQGKT
CVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFNID
RLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLADPAVVNGDSRV
LPPEDFGYPKGTRRWASCINVIDPLSEEGQVLQTIDLENNEAAVSAAIVSFASQDNESFL
VVGTGKDMVVNPRSFSEGYLHIYRFMEGGRELEFIHKTKIEEPPLALLAFQGRVLVAVGT
SLRIYDLGMRQMLRKSQAEVATQQIVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFV
DDTIARWTTCTAMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQSGLHLINARDYLHGT
PHRVSLMCHFYTQDIPTSITKTSLVVGGQEILLWSGIMGTIGVFIPFVSREDADFFQNLE
QHLRTEDPPLAGRDHLMYRGYYAPVKGVIDGDLCERYNLLPNDKKQMIAGELDRSVREIE
RKISDIRTRSAF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacatcgaacatgtttttatattcgcttacggtccagccacctacaaatgtc
acacaggcggtcctgggccagttcgcaggcactcgggaacagctcatcatcactggtgct
ggctcacagctctcactgctacgacctgatccctcccagggaaaggtgattaccctcctc
tctcatgacgtctttggcatcatccgttcccttgccgccttccggttagccggcagcaat
aaggattacttgattattgcttctgactcaggtcggatcacaattattgagtatctcccg
gctcagaaccgcttccagcgattacaccttgaaacattcggaaagtcaggcgtgagaaga
gttattcctggcgagtatcttgcttgcgatcctaagggcagagcctgcttaattgcctca
actgagaagaacaagcttgtttatgtcctaaatcggaattcacaagccgagctcacgatc
tcgtcgcctcttgaggctcacaaaccaggtgtccttgtaatctctatggttgcactcgac
gtcggctactcaaatcctgtcttcgccgcgctcgagattgactactcagaggttgatcag
gattcaacaggccaagccatggaagaactggatactcagcttgtctactacgagcttgat
ttaggacttaaccacgtagtccggaagtggtcggatcctgtcgatcctacagcctcgatc
ctatttcaggttccaggtggcaacgatggtccaagcggtgtgttggtttgcggtgaggaa
aacatcacgtatcgacactcaaatcaagaggccttccgtgttgccatccctcgtcgccgc
ggtgctacagaagatcccaaccgcaaacgaacaattgtgtccggcattatgcacaagcta
aagggcaatacgggtgcgttcttcttcttgttgcaaacggatgatggtgatctcttcaag
ctctccatcgacatgatcgaagatgaagaaggtaatccaacaggagaagttaagaggctc
aaggtcaagtacttcgacaccgttccggtggcgtccagtctttgtatcctcaagagtgga
ttcctctatgttgcaacacagtttggcaactactccttctaccaatttgaaaaacttggt
gacgatgatgaggaactggaattctacagcgacgattttcctgtagaccccaaagcctct
tatgagcctgtgtacttccacccccggccaactgaaaacttggctttggttgagagcatt
cctgccatgaaccccctactagactgcaaggtcgcaaatctcactggcgaagatgcccct
caattatataccatctgtggcaatggcccacgcagcagtttcaggatgctcaaacatggc
ttagaagtcaatgagattgtggcttctgaacttcctggaattccttccgctgtatggaca
ctgaagctgaaccgctcggaacaatacgatgcttacattgtactgtcatttaccaatggt
acgctggttctgagtattggagaaacggttgaggaagtcagcgactcgggtttcctcacg
agcgttcctacgttggcagctcagctgcttggtgacgatggcctgatccaagttcatccc
aaaggcattcgtcatatccgcaatggaaacgtcaatgaatgggcagccccacagcatcgg
tccattgttgccgctaccgccaatgcccatcaagtcgctgtcgccctcagttctggcgag
attgtatacttcgaaatggatgccgacggctcgttagccgagtacgatgagaagaaggaa
atgttcggaacagtcacatgtttgagcttgggagatgtccctgaagggcgcctgagaagc
tcattcctggcagtcggttgtgacgactgcactgtccgtattctaagccttgatcccgaa
tcgactttggaaaacaagtcggtgcaggctctgacagcggcacctacgtcgttagctatt
attgccatggaagactcttcatcgggtggctctacactctatcttcacatcggactccac
tccggtgtgtatcttagaacagttctcgacgagatcaccggtgaattgactgatacccgc
caaaagtttcttggtccgaaggaagtcagactattccaagttactgttcagggcaagact
tgtgtgcttgggcttagctctagaccttggcttggctatgcggatcctatcaccaaggga
tttgttgtgacacccctcaattacgttgacctcgagtggggctggaacttcagcagtgag
caatgcgaagaaggcattgttggtattcaaggccagtcactacggatcttcaacattgat
cgtctcggcgagacattgattcaaaaatctattcctttaacttatacccccaagaagctc
gtcaagcatcctgatcaacctcttttctacactatcgaagcagataacaacacgttgcca
cctgagttgagagcacaactcctcgccgaccctgcggtcgtaaacggcgactccagggtg
ctcccacctgaagactttggctaccccaaaggtactcgaagatgggcatcttgcatcaac
gtaattgatcccttgtctgaagaaggccaagttttgcagacaatagatttggagaacaat
gaggcagccgtcagtgcggctattgtgtcatttgccagccaggataatgagagcttcctc
gtcgttggtaccggtaaagacatggtggtcaaccctcgaagcttttcggaaggatacctc
catatctaccgattcatggaagggggtcgggagcttgagtttatccacaagaccaagatt
gaagaaccaccattggccttgctggcattccaaggaagagtgcttgttgctgttggcaca
tcacttcgcatatatgacttgggtatgaggcaaatgcttcgcaagtcccaggccgaggtc
gcaacacaacagattgtatctctaaacacacaaggcagtcgaatcatcgtaggcgatgtt
cagcagggtgtcacttacgttgtttataagcctgcttctaataagcttattccctttgtc
gatgatacaatcgcaaggtggaccacatgtacagccatggtggattatgaatcagtcgct
ggtggtgacaagttcggtaatatgtttattgtacgttgtcctgagaaggccagtgaagag
gctgatgaggagcaatccggcttgcatctgatcaatgcccgagactatctccatggcaca
cctcacagagtgagcttgatgtgtcatttctacacacaagacattcccaccagtatcact
aagacaagtcttgtggttggtgggcaggaaattttgctatggagtggtatcatgggcaca
atcggagtttttattccatttgtcagtcgcgaagatgcagacttctttcagaacctcgag
caacaccttaggacagaggatcccccactcgccggacgagatcacctcatgtatcgtggc
tattatgcccctgtcaagggagtcatcgacggtgacttgtgcgaacggtacaaccttctg
ccaaacgataagaagcagatgatcgcaggcgagttggaccgctcagtccgagagattgag
aggaagatttctgacatccgcacacgatctgcattttaa
DBGET
integrated database retrieval system