Fusobacterium polymorphum: ERS445057_00353
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Entry
ERS445057_00353 CDS
T08899
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fpol
Fusobacterium polymorphum
Brite
KEGG Orthology (KO) [BR:
fpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpol03009
]
ERS445057_00353 (rlmCD)
Enzymes [BR:
fpol01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ERS445057_00353 (rlmCD)
Ribosome biogenesis [BR:
fpol03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ERS445057_00353 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
TRAM
MTS
Methyltransf_15
DREV
Methyltransf_25
Methyltransf_32
BRCA-2_helical
Ubie_methyltran
bVLRF1
N6_N4_Mtase
SAT
Motif
Other DBs
NCBI-ProteinID:
CKG68990
LinkDB
All DBs
Position
1:complement(369103..370458)
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AA seq
451 aa
AA seq
DB search
MLKISDIIQIKIDKIVFGGEGLGYYNGFAVFVPMSIPEDELEIEIISVKKTYARGLIKNI
IKASPERIDSHKFTFEDFYGCDFAMLKYESQLKYKKLMVEEVMRKIAGLSDIKISDVLAS
EDVYNYRNKIIEPFSVYANKIITGFFRRKSHEVFEVDENILNSKLGNRIIKELKEILNKN
KISVYNEITHKGLLRNIMIRTNSNNEAMVVLIINSNKITENIKKLLFKLRENIEEIKSIY
ISLNSKKTNTVIGENNVFIYGEESIKENINGIEFHISPTSFFQINVKQAKRLYDIAISFF
DDIDNKYIIDAYSGTGTIGMIMAKKAKKVYAIEIVKSASEDGEKTAKENGIENIEFINGP
VEKELVKLINNNKRIDTIIFDPPRKGLEASIIDKVAELNLKEVVYISCNPSTFARDVKLF
SEKGYVLKKLQAVDMFPQTSHIECVGLIEKI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatatctgatattatacaaataaaaattgataaaatagtctttggtggagaa
ggattaggatattacaatggttttgctgtttttgttcctatgtctatacctgaagatgaa
cttgaaattgaaataatttctgtaaaaaaaacttatgctagaggcttaattaaaaatatt
attaaggcttcacctgaaagaatagacagtcataaatttacttttgaagatttttatggc
tgtgattttgctatgcttaagtatgaaagtcaattaaaatataaaaagcttatggttgaa
gaagtaatgagaaaaattgctgggctttctgatattaaaatctctgatgtcctagcaagt
gaagatgtatataattatagaaataaaataattgagcctttttctgtttatgctaataag
attattacaggtttttttagaagaaaaagccatgaagtttttgaagtagatgaaaatatt
ttaaattctaaattaggaaatagaattataaaagaattaaaagaaattttaaataaaaat
aaaatctctgtctacaatgaaattactcataaaggtcttttaagaaatataatgataaga
acaaattctaataatgaagctatggttgtccttattataaattccaataaaattactgaa
aatattaaaaaattattgtttaaattaagagaaaatatagaagaaataaaatctatttac
atttctttaaattctaaaaagacaaatactgtcattggagaaaacaatgtttttatctat
ggtgaagaatctattaaagaaaatataaatggaatagaatttcatatatcacctacttca
tttttccaaataaatgtaaaacaagctaaaagattatatgatatagcaataagtttcttt
gatgatatagacaataaatatataatagatgcttattcaggtactggaactattggaatg
ataatggcaaagaaggctaaaaaagtctatgctattgagatagtaaaatctgctagtgaa
gatggagaaaaaactgccaaagaaaatggaatagaaaatattgaatttattaatggtcct
gttgaaaaagaacttgttaaacttataaataataacaaaagaatagacactattatattt
gaccctccaagaaagggactagaggcttctatcatagataaggttgctgaactgaactta
aaagaagttgtatatatatcttgtaatccttctacatttgcaagagatgtgaagctattt
tctgaaaagggctatgttttaaagaaactacaagctgtggatatgttcccacaaactagc
catattgagtgtgtgggattgatagaaaaaatttga
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