Fusobacterium polymorphum: ERS445057_00581
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Entry
ERS445057_00581 CDS
T08899
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fpol
Fusobacterium polymorphum
Brite
KEGG Orthology (KO) [BR:
fpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpol03400
]
ERS445057_00581
DNA repair and recombination proteins [BR:
fpol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ERS445057_00581
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
AAA_24
DUF7125
nSTAND3
GvpD_P-loop
AAA_14
AAA
AAA_16
AAA_22
NTPase_1
ABC_tran
nSTAND_NTPase5
SLFN-g3_helicase
ATPase_2
DUF4310
AAA_19
NB-ARC
DUF7129
FeoB_N
AAA_29
YhjD
RsgA_GTPase
NACHT
PhaP_Bmeg
MeaB
VapE-like_dom
DAP3
KdpD
CobU
AAA_30
zf-C3HC4_2
Motif
Other DBs
NCBI-ProteinID:
CKG75717
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All DBs
Position
1:596443..597825
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AA seq
460 aa
AA seq
DB search
MAKGTVYYCSECGYKSVKWAGKCPQCGAWSSFEEVDELPKDVKKATSPISVASRNSDIKV
YEFKDVEYTSEDRYKTKYEEFDRLLGGGLLKGEVVLVTGNPGIGKSTLLLQVANSYKDYG
DILYISGEESPTQIKNRGERLKISGEGIYIMAEMDILNIYEYVVTKKPKVVVVDSIQTLY
NSSMDSISGTPTQIRECTLKIIEMAKKYNISFFIVGHITKDGKVAGPKLLEHMVDAVFNF
EGDEGLYYRILRSVKNRFGSTNEIAVFSMEENGMKEIKNSSEYFLSEREEKNIGSMVVPI
LEGTKVFLLEVQSLITDSGIGIPKRVVQGYDRNRIQILTAIAEKKLYIPLGMKDLFVNVP
GGLGIEDPAADLAVLMSILSVHKGFSISQKIAAIGELGLRGEIRKVFFLERRLKELEKLG
FTGVYVPESNRKELEKKKFKLKIIYLKNLDELLERMNKND
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggaactgtatattattgttcagagtgtggatataagagtgtaaaatgggct
gggaaatgtccacaatgtggagcttggtcgagctttgaagaagttgatgaattaccaaaa
gatgtaaaaaaagcaacatctccaatttcagttgccagtagaaactctgatataaaagtt
tatgagtttaaagatgtagaatatacaagtgaagatagatataaaacaaagtatgaagaa
tttgatagattacttgggggaggacttttaaaaggagaagtagttttagtaacagggaat
ccaggaattggaaaatctactttacttttacaagttgctaactcatataaagattatgga
gatattttatatatctctggtgaagagtcccctacacaaataaaaaatagaggagaaaga
ttaaaaatatctggagaaggcatatatattatggctgaaatggatattttaaatatatat
gaatatgttgtaactaaaaaacccaaagttgtagttgtagattctatacaaacattgtat
aattctagtatggattccatatctggtacaccaacacaaattagagaatgtactttaaaa
attatagaaatggctaaaaaatataatatttcattttttatagttggacatatcacaaaa
gatggtaaggttgcaggaccaaaattacttgaacatatggttgatgctgtttttaacttt
gaaggtgatgaaggactttattatagaatacttagaagtgttaaaaatagatttggttca
actaatgaaattgcagtgttcagtatggaagaaaatggaatgaaagaaataaaaaattct
tcagaatactttttaagtgaaagagaagaaaaaaatataggaagtatggttgtaccaatt
ttagaaggaacaaaagtttttcttttagaagtgcaatccctcataacagatagtggaatt
ggaatacctaaaagagttgttcaaggttatgatagaaatagaatccaaattttaactgcg
atagcagaaaaaaaattatatattccacttgggatgaaagatttatttgttaatgtccca
ggaggattgggaatagaagacccagcagctgatttggcagtattaatgtctattctatct
gtccataaaggtttctctataagccaaaaaatagctgcaataggagaacttggattaaga
ggagaaataagaaaagtatttttcttagaaagaagattaaaagaacttgaaaaattaggt
tttacaggagtttatgttccagaatcaaatagaaaagagctagaaaaaaagaaatttaaa
ctaaaaataatatacttaaagaatttagatgaattattggaaaggatgaataagaatgac
taa
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