Fusobacterium polymorphum: ERS445057_01134
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Entry
ERS445057_01134 CDS
T08899
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
fpol
Fusobacterium polymorphum
Pathway
fpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ERS445057_01134 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpol03400
]
ERS445057_01134 (xseA)
Enzymes [BR:
fpol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ERS445057_01134 (xseA)
DNA repair and recombination proteins [BR:
fpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ERS445057_01134 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
GTP-bdg_M
RecJ_OB
START_2
DUF7968
Motif
Other DBs
NCBI-ProteinID:
CKG90142
LinkDB
All DBs
Position
1:complement(1154738..1155952)
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AA seq
404 aa
AA seq
DB search
MEKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNITYYKSGHLYFSIKDGKSQIKCAAF
NYKLKRIPEDLKEGDLIKLFGDVGFYEVKGEFQVLVRYIEKQNALGSLYAKLEKVKEKLA
GLGYFDEEHKKDLPRFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE
QEIIKGIETLNKIEDIDFIIAGRGGGSIEDLWAFNEEEVAIAFFNSKKPIISAVGHEIDF
LLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKRELLLRIEN
YHFKNFPNTINNLREIIVEKEICLKDAIERFIEQKRNIFENKIDKITVLNPINTLKRGYT
VSQVKNKRIDVLDDIEINDEMITILKDGKVISIVKEKIYEKNSN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaatatattcagtatcagaattcaacagaatggtaaaaagctatatagatgat
attgatgattttcaagaattttttattgagggagaaatttcaaatattacttactataaa
agtgggcatctatatttttcaataaaagatggtaaatcacaaataaaatgtgcagctttt
aattataaattaaaaagaattcctgaagatttaaaagaaggagatttaataaaattattt
ggtgatgttggtttctatgaagttaaaggagaatttcaagttttagttagatatatagaa
aaacaaaatgctttgggtagtctttatgctaaacttgaaaaagttaaagaaaaactagct
ggacttggatattttgatgaggaacataaaaaagatttacctagatttcctaaaaatatt
ggagttgtaactgctttaacaggagcagcccttcaagacattatcaagacaacaagaaaa
agatttaattcaattaatatttatatttatcctgcaaaagtacaggggattggtgcagaa
caagaaattataaaaggtattgaaacactaaataaaattgaagatatagactttattatt
gcaggtagaggtggaggaagtatagaagatttatgggcatttaatgaagaagaggttgca
atagcattctttaattcaaagaaacctataatatcagctgtagggcatgagatagatttc
ttactatctgatttgacagctgataaaagagctgcaactcctactcaagcgatagaactt
tctgttccagaaaaagaaagtttattagatgatttaaaagctagagaaatctatataact
aaactattaaaatcttatgttgataatatgaaaagggaattattattaagaatagaaaat
tatcactttaaaaattttccaaatacaattaataatttaagagaaattatagttgaaaag
gaaatatgtttaaaagatgcaatagaaagatttatagagcaaaaaagaaatatttttgaa
aataaaatagataagattacagttttaaatcctataaatacattaaagagaggctatact
gtaagtcaagtaaaaaataaaagaatagatgttttagatgatatagaaatcaatgatgaa
atgataactatattaaaagatggaaaagtaataagtatagttaaggagaaaatttatgaa
aaaaatagtaattag
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