Fusobacterium polymorphum: ERS445057_01594
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Entry
ERS445057_01594 CDS
T08899
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fpol
Fusobacterium polymorphum
Pathway
fpol02020
Two-component system
fpol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ERS445057_01594
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ERS445057_01594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpol03021
]
ERS445057_01594
Transcription machinery [BR:
fpol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ERS445057_01594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Fe_dep_repress
HTH_AraC
HTH_24
HTH_17
HTH_5
MarR
HTH_1
HTH_38
MarR_2
HTH_23
LacI
HTH_Tnp_ISL3
HTH_AsnC-type
Sigma70_r4_2
HTH_28
HTH_IclR
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
CKH02294
LinkDB
All DBs
Position
1:complement(1621482..1622705)
Genome browser
AA seq
407 aa
AA seq
DB search
MDNKLDIIEKQKLIQSLKLSQIMKLSINILKMSITELNNFIEKEISKDLSVSVELNYSNQ
ENYDDEKEAEINYLTDEKNFFQILEEQLSYFKIETKIKEICVFIINNLNKKGYLELSKIE
IKDILEVSDKELDEAFDVIHSLEPYGVGAYSLEECLKIQLKVKNLIDDKLFLFIDNYLYL
LADKKYDLIKEKLNINDEQLFIYIDIIKSLNPIPSRGYSVGKVKKIIPDIFVETKKDEVF
YEINRASIPQINVKDKINDKYYKKLNEIVSCIEKRFETLDKIMEIIIREQKSFFISQDKE
INTLKISDVASELNLSPSTVSRAVKEKYIKTNFGIISLRKLFNLDSTVFLYQQKILEYIE
NENKEQPFSDQDIVNLLEKEGIKIARRTVTKYREKLGYKSSHKRKKY
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggataataagttagatattattgaaaaacaaaaattaatacagtctttaaaattatca
caaataatgaagttatctataaatatacttaaaatgtctataacagaattgaataatttt
attgaaaaagaaatttcaaaagatttgagtgtttcagttgaattaaactattctaatcaa
gagaattatgatgatgaaaaagaagcagaaattaattatttaacagatgaaaaaaatttc
tttcaaattttagaagaacaattatcttattttaaaatagaaacaaagataaaggaaatt
tgcgtatttataatcaataatttgaataaaaaaggatatttagaattatcaaaaattgaa
ataaaagatattttagaagtaagtgacaaagaattagatgaagcatttgatgtaattcat
agtttagagccttatggagttggtgcttattcgttggaagaatgtttaaaaattcaatta
aaagtcaaaaatttgatagatgataaattatttttatttatagataactatctatatttg
cttgcagataaaaaatatgacttgataaaggaaaaactaaatattaatgatgaacaacta
tttatctatatagatattattaaatcactgaatcctattcctagccgtggttatagtgtt
ggaaaagtaaaaaaaattattccagatatttttgtagaaacaaaaaaagatgaggtattt
tatgaaataaacagagcttcaatacctcaaataaatgtaaaagataaaataaatgataaa
tattataaaaaattaaatgaaatagtaagttgtattgaaaaaagatttgaaactcttgat
aaaattatggagattattattagagaacaaaaaagcttttttataagccaagataaagaa
attaatactttaaaaatttctgatgttgcttctgagctaaatttaagtccttcaacagta
tcaagagcagtaaaagaaaaatatataaaaacaaattttggtataatttctttaagaaaa
ctttttaatttggattcaacagtatttctatatcaacaaaaaattttagaatatattgaa
aatgagaataaagaacaacctttttcagaccaagatatagtaaatcttttagaaaaagaa
ggaataaaaatagctagaagaacagtaacaaaatacagagaaaaattaggttataaatct
tctcataaaagaaaaaaatattaa
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