Fusobacterium polymorphum: ERS445057_01667
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Entry
ERS445057_01667 CDS
T08899
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpol
Fusobacterium polymorphum
Pathway
fpol03420
Nucleotide excision repair
fpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERS445057_01667 (pcrA_2)
03430 Mismatch repair
ERS445057_01667 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpol03400
]
ERS445057_01667 (pcrA_2)
Enzymes [BR:
fpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERS445057_01667 (pcrA_2)
DNA repair and recombination proteins [BR:
fpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERS445057_01667 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
ERS445057_01667 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
CarD_TRCF_RID
PcrA_UvrD_tudor
GPAT_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
CKH04041
LinkDB
All DBs
Position
1:complement(1698787..1701000)
Genome browser
AA seq
737 aa
AA seq
DB search
MNLNLLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVT
FTNKAAKEMRERVEGLVGDIAKACTISTFHSFGMRLLRMYASEVGYNPNFTIYDTDDQKR
IVKAILKGQNISFNGVKLTERDIVSIISKIKEEIKTPDEYSVINKQIIEVYDKYNKALLE
SNAMDFSDILLNTYKLLQKPEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLC
VVGDENQSIYGFRGANILNILNFENNYNNAKIVKLEENYRSTTTILDAANELIKNNKSSK
DKKLWTQNGKGDLIKVLACDNGRDEVSRIIEFIRENHQNGVPYRDMTILYRTNAQSRIFE
EGLLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKVGEKGIE
KIIAYARENDLNLLEALSHIKEISGLTAVGKEKLLEMYDIIKELKDLAYTETASYIVQTL
IDKIHYIDYINENYDDAEARIENIDEFKNSILELENVVGELRLNEYLENVSLISATDDLE
EKSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGTRAMLDEKEMEEERRLCYVALTRAEK
KLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIEVKKERLYFADDYSDEINTYGNNKK
FEKKKTEINTKNTIKLDENTKKVIDNLGFKVGDKVRHKKFGLGVIKSIDAKKIYVQYVDG
TKEMALILADKLLTKSE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgaacttattagaaaagctaaatgacaaacaaagagaagcagcctctcaaatt
gatgggtctattttaattttggcaggagctggttctggaaaaacaagaacaattacatat
agaatagcacatatgatagagaatgttggaattagcccttatagtattttagctgttact
tttacaaataaggcagctaaggaaatgagagaaagagttgaaggccttgttggagacata
gctaaggcatgtacaatttctactttccactcatttggtatgagacttttaagaatgtat
gcaagtgaagtggggtacaatccaaactttactatatatgatacagatgaccaaaaaaga
atagtaaaagctattttaaaaggacaaaacataagttttaatggagttaaattgacagaa
agagatattgtttctattatttcaaaaatcaaagaagaaataaaaactcctgatgagtat
tcagttatcaataaacaaataattgaagtatatgataaatacaataaagcattgttagaa
agtaatgctatggatttttcagatatacttttaaatacatataaattattacaaaaacca
gaaatacttgaaaaagttcaaaataaatataaatacataatgatagatgaatatcaagat
acaaataacttacaatataaaataatagatttaattgctagaaaatcatctaatctatgt
gtagttggagatgaaaaccaaagtatttatggatttagaggtgcaaacattttaaatatc
cttaactttgaaaataactataataatgctaaaatagtgaaattagaagaaaattataga
tcaactactacaatattagatgcagcaaatgaacttataaaaaataataaatcatcaaaa
gataaaaagttatggacacaaaatggaaaaggtgatttaataaaagttttagcttgtgat
aatggtagagatgaggttagtagaataattgaatttattagagaaaatcatcaaaatggt
gtaccctatagagatatgacaatattgtatagaaccaatgcccaatcaagaatatttgaa
gaagggcttttaagatataacatacctcataaagtttttggaggaataagtttctattca
agagcagagattaaagatataattgcatatttatctattattgttaatccacaagatgaa
ttaaatttacaaagaataatcaatgttcctaaaagaaaagtaggagaaaaaggaatagaa
aaaataattgcttatgctagagaaaatgatttaaacttacttgaagcactttctcatata
aaagagatttctggactaactgctgttggaaaagaaaaacttttagaaatgtatgatata
ataaaagagttaaaagacttagcttatactgaaacagcttcatatatagtacaaactttg
attgataaaatacattatatagactatattaatgaaaactatgatgatgcagaagcaaga
attgaaaatatagatgaatttaaaaactctatcttagaattagaaaatgttgtaggagaa
ttgagattaaatgaatatttagaaaatgtctctcttataagtgcaacagatgatttagag
gaaaaaagtgactatgtaaagttaatgactattcataactcaaaaggtcttgaattccca
atagtttttttagttggttttgaaaatgaaatctttcctggaacaagagcaatgcttgat
gaaaaagaaatggaagaagaaagaaggctttgttatgttgctttaacaagagctgaaaag
aaactttatttatctcatgcaactataaggtttgtatatggtcaagatagattgtcaact
ccatcagtatttttgaaagaaataccagaaaagcttttagatattgaagttaaaaaagaa
aggctatattttgctgatgattattcagatgaaataaatacttatggaaataataagaag
tttgaaaagaaaaaaactgaaataaataccaaaaatactataaaacttgatgaaaatact
aagaaagtaattgataatttaggttttaaagtaggagataaagtaagacataaaaaattt
ggcttaggggtaattaaaagtatagatgctaaaaaaatctatgtacaatatgttgatggt
acaaaggaaatggctcttatcttagctgataaacttttaactaagtctgaatag
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