Fusobacterium polymorphum: ERS445057_01777
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Entry
ERS445057_01777 CDS
T08899
Symbol
pcrA_3
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpol
Fusobacterium polymorphum
Pathway
fpol03420
Nucleotide excision repair
fpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERS445057_01777 (pcrA_3)
03430 Mismatch repair
ERS445057_01777 (pcrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpol03400
]
ERS445057_01777 (pcrA_3)
Enzymes [BR:
fpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERS445057_01777 (pcrA_3)
DNA repair and recombination proteins [BR:
fpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERS445057_01777 (pcrA_3)
MMR (mismatch excision repair)
Other MMR factors
ERS445057_01777 (pcrA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
Cas_Cas4
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
DUF2800
PhoH
NAT10_TcmA_helicase
CowN
DEAD
Motif
Other DBs
NCBI-ProteinID:
CKH06646
LinkDB
All DBs
Position
1:1804248..1807007
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AA seq
919 aa
AA seq
DB search
MSNLNKKQFEAVETVNGPVVIIAGPGTGKTKTLVERTVNILVNKEVEAKKIMITTFTNKA
AKELELRINERLEELNKNIDISDIYLGTMHSIWTRLIQENITYSNFFDNFELMSGDYEQH
FFIYSRLKEYKKLEDYQKFFDNLSYNENKYRSDWQKSSFLRNKINDLNENAIDIESVQTS
DIYINFIKSTYKLYEKQLFENNIVDFSYLQVEFLNMLLNNADFLEKINNHFDYIMVDEYQ
DSNKIQEKILLSISKNKKNICVVGDEDQSIYRFRGASAENILNFSKHFGEGECKLIVLEE
NYRSVNDIVEFNNKWINAIDWHGNRFEKNIVSMRLDNILSKSVFHISGSTLDENIRNTVT
FIKKLKQSNKITNYNQIAVLFSHFKDRSAKKLEDALKKENIEVYSPRTKVFFEMYEVKLT
FGVILACFKKYFPEEVLDTYLLECLDLARLEIRKDNEFLAWIKEKIENISEYSFNSLNEI
FYELLSFSYYKNVLKEEGPIEARANHNLAILSKIFKNFQKYVHSKKISIEDDFSIIKYFF
TKYLEILKQSRVDEIFSEEDYPNDCIPFLTIHQSKGLEFPVVIVFSLYSKPNVSGDLSRQ
TSIDRLINSNSKISEIEKEYFDFYRKFYVAFSRAKNLLVLSCYEKGVSENFKPFFYSVRG
VNSLQFDIDQINLDEVSKKDERRVLSYTTDIALYRYCPMKYFLVREKEYSTYDKKVFSLG
IITHKAIEHINKSFLQKQEIFSDNYIEDLVKNIYKFQNIDLDNNVEKIIDITKKYMENEK
DNFKYIKKVEASEFRVEDNYILYGQIDLILEDENEIKIIDFKTGKYNEIEFSSNYRQQLS
LYKLLLQKKYDKEIKTYLYYLEEDKPKKEILIDDEDLKEDLENINKTTQDILDKKFPKIP
YNKNICGLCEFKNYCWGIQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttgaataaaaaacaatttgaagcagttgaaactgtcaatggtcctgttgta
ataatagcagggcctgggacaggaaaaacaaaaactcttgttgaaagaactgtaaatatc
cttgtaaataaagaagtagaagctaaaaaaattatgattactacttttacaaataaggct
gctaaagaattggagcttagaataaatgaaagattggaagaattaaataaaaatatagat
ataagtgatatatacttaggaactatgcattctatttggacaagacttatacaagaaaat
attacttattctaatttttttgataactttgagcttatgagtggagattatgagcaacac
ttttttatttattcaagattaaaagaatataaaaaattagaagattatcaaaagtttttt
gataatctttcttataatgagaataaatatagaagtgattggcaaaagagttcttttctt
agaaataaaataaatgatttaaatgagaatgcaatagatattgaaagtgtgcaaacttct
gatatttatataaattttataaaatctacttataaactttatgaaaaacaactttttgaa
aataatatagttgatttttcttatttacaagtagaatttttaaatatgcttttaaataat
gctgattttttagaaaaaataaataatcattttgactatattatggttgatgaatatcaa
gatagtaacaaaattcaagagaagatattgctttctatttccaaaaataaaaaaaatatc
tgtgttgtaggagatgaagatcaatctatatatagatttagaggagcaagtgcagaaaat
attttaaatttttctaaacattttggagaaggtgaatgtaaacttatagtattagaggag
aactatcgttcagtaaatgatatagttgagtttaataataagtggataaatgctattgat
tggcatggaaatagatttgaaaaaaatatagtatcaatgagattagataatattttaagt
aaaagtgtttttcatatttctggaagtaccttagatgaaaatattagaaatactgtaact
tttataaaaaaattaaaacaaagtaacaaaattacaaactataatcaaatagcagtttta
ttttcacattttaaagataggtctgcaaaaaaattagaggatgctttaaaaaaagaaaat
attgaagtttattctccaagaacaaaagttttctttgaaatgtatgaagtaaaattaact
tttggtgtaattttagcttgttttaaaaagtattttccagaagaagtacttgatacatat
ttattggagtgtctagatttagcaagattagaaattagaaaagataatgaatttttagct
tggataaaagaaaaaattgaaaatatttctgaatatagttttaactctttaaatgaaatt
ttttatgaattattaagtttttcttactataagaatgttttaaaagaagaaggccctatt
gaagcaagggctaatcataatctggctatacttagtaagatatttaaaaactttcaaaag
tatgtacattctaaaaaaataagtattgaagatgatttttctataattaaatattttttc
acaaaatatttagaaatcttaaaacagtcaagagttgatgagattttttctgaggaagat
tatcctaatgattgtatcccatttttaactatacaccaatcaaaaggtttagaatttcca
gtagttattgtattctcattatattctaaacccaatgtaagtggagatttatcaagacag
acaagtatagatagacttatcaattcaaattctaaaatctctgagatagaaaaagaatat
tttgatttttatagaaaattctatgtggcttttagtagagcaaaaaatttattagtttta
agttgctatgaaaaaggagtatctgaaaactttaaaccttttttctattcagttcgtgga
gtaaatagtttacaatttgatattgaccaaataaatttagatgaagttagtaaaaaagat
gaaagaagagttttatcatatacaactgatattgcactttatagatattgtcctatgaaa
tattttttagtgagagaaaaagaatattcaacttatgataaaaaagtatttagtttagga
ataataactcacaaggcaatagaacatataaataaatcatttttgcaaaaacaagagatt
ttttctgataactatatagaagatttagtgaaaaatatctataaatttcaaaatatagat
ttagataataatgttgagaaaataatagatatcactaaaaaatatatggaaaatgaaaaa
gataactttaaatatataaaaaaggttgaagcttctgaatttagagttgaagacaattat
attctatatgggcaaatagatttaattttagaagatgaaaatgaaattaaaattatagac
tttaaaactggaaaatataatgaaattgagttttcttctaattatagacaacaactatca
ctatataaattacttcttcaaaaaaaatatgataaggagataaaaacttatctatattat
ttagaggaagataagcctaaaaaggaaattcttattgatgatgaagatttaaaagaagat
ttagaaaatataaataaaacaacacaagatattttagataagaaatttcctaaaattcca
tataataaaaatatctgtgggctttgtgaatttaaaaactattgttgggggatacaatga
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