Fusobacterium polymorphum: ERS445057_01822
Help
Entry
ERS445057_01822 CDS
T08899
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fpol
Fusobacterium polymorphum
Pathway
fpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERS445057_01822 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpol03021
]
ERS445057_01822 (rho)
03019 Messenger RNA biogenesis [BR:
fpol03019
]
ERS445057_01822 (rho)
Transcription machinery [BR:
fpol03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ERS445057_01822 (rho)
Messenger RNA biogenesis [BR:
fpol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ERS445057_01822 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_24
Spore_III_AA
DUF2113
OB_RNB
AAA_19
AAA
Rho_N
Motif
Other DBs
NCBI-ProteinID:
CKH07654
UniProt:
A0A1Z3CHS9
LinkDB
All DBs
Position
1:complement(1860115..1861356)
Genome browser
AA seq
413 aa
AA seq
DB search
MDILNKLLLKDLQEIAKVMEIEVSVGQKKDELKKLISHSLEENNTELAYGILDTAPEGFG
FLKETTLGKNIYMSASQIKRFKLRRGDQVLGEVRKPIGEEKNFAIRRVLKANDNDLAALE
SRIPYEELIPTYPTEQFKLGIEQDNISGRILDLISPIGKGQRALIIAPPKAGKTTFISSI
ANALIEGQKDSEVWILLIDERPEEVTDIKENVEGATVFASTFDDDPKNHIKVTEEIIEKA
KMKVEDGENVVILLDSLTRLARAYNIVMPSSGKLLSGGIDPTALYHPKNFFGAARNIKNG
GSLTIIATILVDTGSKMDEVIYEEFKSTGNCDIYLDRQLAEFRIFPAIDITKSGTRKEEL
LLDKNQIDEIWNLRRLLNDYDNKVSATSALIKAIKTTRDNDELLAQLPKVLYK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggatattttaaataaacttcttttaaaagatttacaagaaatagcaaaggtcatggaa
atagaagtaagtgtaggccaaaaaaaggatgaattaaaaaaactaatatcacattccctt
gaagagaataatacagaacttgcctatggtatattagacacagcaccagaaggctttggt
tttttaaaagaaacaacattggggaaaaatatctatatgtcagcttcacaaataaaaaga
tttaaacttagaagaggcgatcaagtcttaggtgaagttagaaaaccaataggtgaagaa
aagaactttgcaataagaagagttctaaaagctaatgataatgatttagcagcactagag
agtagaattccctatgaagagttaatcccaacttatccaacagaacaatttaaacttggt
atagaacaagataatatttctggtagaatattagatttaatatctccaataggaaaagga
caaagagctttaataatagcaccaccaaaggctgggaaaacaacttttataagttctatt
gccaatgccttaatagaaggtcaaaaagattcagaagtttggatattactaatagatgaa
agaccagaagaagttacagatatcaaagaaaatgttgaaggagcaacagtctttgcttca
acatttgatgacgatccaaaaaatcatataaaagtgacagaagaaataatagaaaaagct
aaaatgaaagttgaagatggagaaaatgtagtaattttactagattctttaactagactt
gcaagagcatacaatattgtgatgccttcaagtggaaagctactttcaggagggatagat
ccaacagcactatatcatccaaaaaacttttttggtgcagctagaaatataaaaaatggg
ggaagcttaacaattattgctacaattcttgttgacacaggaagtaaaatggatgaagtt
atctatgaagaatttaagtcaacaggaaattgtgatatttacttagatagacaattagct
gaatttagaatttttcctgcaatagacatcactaaatcaggaacgagaaaagaagaatta
cttcttgataaaaatcaaatagatgagatttggaatttaagaagattactaaatgattat
gataataaagttagtgctacctcagcactaataaaggcaataaaaacaactagagacaat
gatgaattattagcacagctccctaaggttctgtacaaataa
DBGET
integrated database retrieval system
