Frischella perrara: FPB0191_00384
Help
Entry
FPB0191_00384 CDS
T03525
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
fpp
Frischella perrara
Pathway
fpp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FPB0191_00384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpp03021
]
FPB0191_00384
Transcription machinery [BR:
fpp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FPB0191_00384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
D27-like_C
Eclosion
DUF16
TMPIT
Motif
Other DBs
NCBI-ProteinID:
AJA44222
UniProt:
A0A0A7S006
LinkDB
All DBs
Position
complement(402860..404695)
Genome browser
AA seq
611 aa
AA seq
DB search
MEQNSQSQLKHLIIRGKELGYLTYADLNDHLPEEIIDSDQIEDIIQMINDMGIQVLEEAP
DSDEMLLSDNVPDEEAVEAATALVLSNVESEIGRTTDPVRMYMREMGAVELLTREGEIDI
AKRIEDGINQVQTSVSEYPEAITYLLEQYNLVEQGTVRLSDLITGFVDPNAQEGMDDLPE
DLVSHDADIDLDDEVDDDEETESTDDDSSIDPEVAREKFLALKTQHEITSEAIKKYGRAN
KKARQEIENLSEIFKQFRLVGKQFEILVNNMRQMMDRVRSHEHLIMKICIEQCKMPKKQF
MSYFIGNENNMSWFEKATKSKHAYGEKLKEFESQIAKETEQLQKIEIETDLSIEQIKDIN
RRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYR
RGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQILQEIGREPTPEE
LSEKMQMPEDKIRKVLKIAKEPISMETPVGDDEDSHLGDFIEDTAMEQPLDAATSESLRA
ATRDILEGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPS
RSDVLRSFLDE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaactctcaatcacaactcaaacatctgatcatacgaggtaaagagcttggc
tatttaacctacgcggatctgaatgatcatttacctgaagaaattatcgattcagatcag
atcgaagatattattcaaatgatcaatgatatggggattcaggttcttgaagaagcacct
gattctgatgaaatgctattatcagataatgttcccgatgaagaagccgttgaagcagcc
acagctttagtattatctaatgttgaatcagaaattgggcgaacaactgatcctgtgcgc
atgtatatgcgtgaaatgggggcggtagagctgttaacacgtgaaggcgaaattgatatt
gctaaacgtatagaagatggtatcaaccaagtgcaaacttctgtttcagaatatcctgaa
gcaattacttatcttcttgaacaatataatttagttgagcaaggaacagttcgtttatca
gatttaattactggctttgtcgatccaaatgctcaagaaggtatggatgatttaccagaa
gatttagttagtcatgatgcagatattgatcttgatgatgaagtggatgacgacgaagaa
acagaatctacagatgatgattcatcgatcgatcctgaagttgctcgcgaaaaattctta
gcacttaagacgcaacatgaaataacgtcagaagcgattaaaaagtatggtcgtgcaaac
aaaaaagctcgtcaggagattgaaaatttatcagaaatctttaagcaattccgcctagtc
ggtaagcagtttgaaattctggttaataatatgcgtcaaatgatggatcgcgtgagatct
catgaacatttgattatgaaaatttgcattgaacaatgcaaaatgcctaaaaaacaattc
atgagttatttcatcggaaacgaaaataatatgagttggtttgaaaaagcgaccaaatcc
aaacatgcatatggtgaaaaactcaaagagtttgaaagccagattgctaaggaaacagaa
cagctacaaaaaatcgaaattgaaaccgatctatctattgaacaaataaaagatatcaat
cgtcgaatgtcgattggtgaagcaaaagctagacgtgctaagaaagagatggttgaagca
aatttacgtctcgttatctcaattgcaaaaaaatacactaaccgtggtttacaattccta
gaccttatacaggaaggtaacatcggtttgatgaaggctgttgataaatttgaatatcgt
cgtgggtacaaattctcgacttatgcaacttggtggattcgtcaggcaattacgcgttca
attgctgatcaggcaaggacaattcgtattcctgtacatatgattgaaacaatcaataaa
ctcaatcgtatttcacgtcaaattttacaagagattggacgtgaaccaacaccggaagag
ttgtcagaaaaaatgcaaatgcctgaggataagattcgtaaggtgttaaaaattgctaaa
gagccgatctctatggaaacgccagttggtgatgatgaagattcacatcttggtgatttt
attgaagatacagcaatggagcaaccacttgatgcagctacatcagaaagtttacgcgca
gctactcgtgatatattagaaggtttaacgccacgagaagcaaaagtgttaagaatgcgc
tttggtattgatatgaatactgaccatacactggaagaagtgggtaaacaattcgatgta
actcgagaacgtattcgtcagattgaggcaaaggcattacgtaaattacgtcatcctagt
cgttctgatgtattacgtagcttcttagacgaataa
DBGET
integrated database retrieval system
