Frischella perrara: FPB0191_00622
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Entry
FPB0191_00622 CDS
T03525
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
fpp
Frischella perrara
Pathway
fpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPB0191_00622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpp03400
]
FPB0191_00622
DNA repair and recombination proteins [BR:
fpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPB0191_00622
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FPB0191_00622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF8810
HEM4
Microtub_bd
P-loop_SecA
Cas3-like_C_2
Kinesin
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AJA44453
UniProt:
L0ARL5
LinkDB
All DBs
Position
709568..711571
Genome browser
AA seq
667 aa
AA seq
DB search
MRDFKLCSDFKPAGDQPEAIKRLNQNLEDGIAHQTLLGVTGSGKTFTMANVIATHNRPTV
ILAPNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPESYVPSTDTFIEKDSSINEHIEQ
MRLSATRSLLERRDVVIVASVSAIYGLGAPETYMAMILHLSKGTITDQRAILNRLADMQY
KRNDMGFSRGTFRVRGDVIDIFPADSDTLAVRVELFDDEVERIALFDPLTGSIVSELPRI
TVHPKTHYATPRNILDNAVAEIKQELLERQKILLSENRLLEEQRLTQRTLFDIEMMTELG
YCSGIENYSRYLAQRKAGEPPATLFDYLPADGLLFIDESHVGIPQLGAMYNGDRSRKLTL
VDYGFRLPSALDNRPLKFTEFEKIMPQTIYVSATPGKYELEKSGSEVIDQVVRPTGLLDP
IIEVRPVATQVDDLLSEIKQRIAKQERVLVTTLTKKMAENLTDYLSEHNVKVKYLHSDIN
TVERMEIIRDLRLGEVDVLVGINLLREGLDIPEVSLVAILDADREGFLRSTSSLIQTVGR
AARNQYGKAILYADKITPAMQKTMDETARRRKKQEDFNTEHGITPTSVKKDIFDILEAGL
STKKSTSKIKEFEPGKNYEHMSVKDVQARINELEAMMYEAAKNLEFERAGVLRDEIKQLR
SSFISLS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcgagattttaaattgtgttctgattttaaaccggcaggtgatcaaccagaggcaatt
aaaaggttaaatcaaaatttagaggatggaatagctcatcaaacattattgggagtaaca
ggatccggtaaaacgttcacaatggcaaacgtgatcgcaactcataatcgtccaaccgtg
atccttgcgccaaataaaacgcttgctgctcaattatatggggagatgaaggctttcttt
cctgaaaatgcggttgagtatttcgtatcatattatgattattatcagccagaatcctat
gttcctagcacggatacctttattgagaaagattcatcaattaatgagcatatagagcag
atgagattatcggcaacccgatcattattggaaagacgcgatgttgtgatcgttgcctcc
gtgtcggcaatctatggtttaggggcaccagaaacctatatggcgatgatcttacatctt
tctaaaggaacgattaccgatcaacgtgcgattttgaatcgtttggctgatatgcaatat
aaacgcaatgatatgggatttagccggggtacgtttcgggttagaggcgatgttattgat
atttttccggctgattcagacacactcgcggttcgagttgaattatttgatgatgaagtg
gaaagaatcgctttatttgatccattgacgggaagtattgtgagtgagttaccacggata
acggtgcatccaaaaactcattatgctacgccaagaaatattttagataatgcagttgct
gaaattaagcaagaactgctcgaacgacagaagatcttattgtctgaaaatcgtttactt
gaagaacagcgtttaacccaacgtaccttgtttgatattgagatgatgacagaactaggc
tattgttcaggtattgagaactattctcgatatttagcacagcgtaaagcaggggaacct
ccggcgacgttatttgattatttacctgccgatggcttgctgtttattgatgaatcacat
gtgggtattccacagttaggggcgatgtataacggcgatcgttcgcgtaagcttacatta
gtcgattatgggtttcgtttgccatcggcattagataatcgaccattgaagtttaccgag
tttgaaaaaattatgccccaaactatttatgtttcggcaacaccgggtaaatatgaacta
gaaaaatcgggttctgaagttattgatcaggttgttagaccgaccggtttacttgatccg
attattgaagtgcgacccgtcgctactcaggttgatgatctgttatcagaaattaagcaa
cgaattgcaaaacaagaacgggtattagttacaacgttgacaaagaaaatggcagaaaac
ttaacggattatttatctgaacataatgtaaaggtgaaatatttgcattcagatattaat
actgttgaacgaatggaaattattcgtgacttaagattgggggaagttgatgttttagtg
ggtatcaacttattacgtgaaggtttggatatccctgaagtgtctttagttgcaatttta
gatgccgatagagaaggttttttacgttctactagctcattgattcaaacagtgggaagg
gctgcgcgtaatcaatatggaaaagctattttatatgctgataaaattacgcctgcaatg
caaaaaacgatggatgaaaccgcgcgacgtcgcaaaaaacaggaagattttaatactgaa
catggtataacaccgacttcagtcaagaaagatatatttgatatattagaagcaggatta
agtactaaaaagtcaaccagtaaaattaaagagtttgaaccaggcaaaaattatgagcat
atgtcagttaaagacgttcaagctcgtataaatgaacttgaggctatgatgtacgaagct
gctaagaatcttgaatttgagcgtgctggtgtattgagggatgagataaagcagttaaga
agtagttttataagtttgtcctaa
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