Frischella perrara: FPB0191_00845
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Entry
FPB0191_00845 CDS
T03525
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fpp
Frischella perrara
Pathway
fpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPB0191_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpp03019
]
FPB0191_00845
Enzymes [BR:
fpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPB0191_00845
Messenger RNA biogenesis [BR:
fpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FPB0191_00845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ERCC3_RAD25_C
PGM_PMM_III
DALR_1
Motif
Other DBs
NCBI-ProteinID:
AJA44671
UniProt:
A0A0A7S5W4
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All DBs
Position
complement(945557..946252)
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AA seq
231 aa
AA seq
DB search
MGFIHDIRRVIAKLPKKRQNLLFSATFSNEIKQLAQSLLNNPETISVAANNSTSEQVTQY
VHHVDKKRKRELLSYLIGTQRWSQVLIFTRTKYGANHLAEQLNKDGIKAAAIHGNKSQGA
RTKALTDFKDGKITALVATDIAARGLDIEQLPYVVNYDLPHVAEDYVHRIGRTGRAQNRG
KAISLVCIDEHPQLKAIEKLIKVQIPQMFTEGFAINPDIKPSPKNKRQKQR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgggattcatccatgatattcgtcgcgtcattgctaaattacctaaaaaacgccaaaat
ttattattctcagcaactttttccaatgagatcaaacaacttgcacaatctcttttaaat
aatccagagactatttcagttgcagcaaataatagtacttctgaacaagtgacacaatat
gttcatcatgttgataaaaaacgtaaacgtgaattattatcctatcttattggcactcaa
agatggtcgcaagtgcttatttttactcgtacaaaatatggcgccaatcatttagctgaa
caactaaacaaagatggtatcaaggcagctgctattcatggcaataaaagtcaaggcgca
agaaccaaagcattaacggattttaaagatgggaaaatcactgctttagttgcgactgat
attgcagcacgagggctagatattgaacagctaccttatgttgttaattatgatctaccc
catgttgcagaagattatgttcatagaatcggacgcacaggaagagcgcaaaatagaggt
aaagctatttcattagtttgcattgatgaacatccgcaattaaaggcgattgaaaaatta
attaaagttcagataccacaaatgtttactgaaggttttgctatcaacccagatattaaa
ccaagccctaagaacaaacgacaaaagcaaagataa
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