Frischella perrara: FPB0191_01304
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Entry
FPB0191_01304 CDS
T03525
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fpp
Frischella perrara
Pathway
fpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPB0191_01304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpp03019
]
FPB0191_01304
03400 DNA repair and recombination proteins [BR:
fpp03400
]
FPB0191_01304
Enzymes [BR:
fpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPB0191_01304
Messenger RNA biogenesis [BR:
fpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FPB0191_01304
DNA repair and recombination proteins [BR:
fpp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FPB0191_01304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SecA_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AJA45124
UniProt:
A0A0A7S0Q3
LinkDB
All DBs
Position
complement(1479485..1481311)
Genome browser
AA seq
608 aa
AA seq
DB search
MIADQAKDILQNIFGYKTFRHKQLQIIESIMAGEDNLVIMPTGGGKSLCYQIPALLCSGI
TIVISPLIALMKDQVDQLAAFGIKAAYLNSMLSNEEQREVIRQYSCNEIKMLYIAPERLV
TSMFSAIIQQYPPALISIDEAHCISQWGHDFRPEYLQIGSFKTRFPQVPVIALTATADEM
TRKDIIERLNLNNPNIHISSFDRPNIRYTVMERNDQIKQITDFLALQAGQSGIIYCSSRA
KVENMATKLSLKGFSVMVYHAGLTRAERAKAQERFLKDQIQIMIATIAFGMGINKSNVRF
VIHADAPRTIEAYYQETGRAGRDGLPAEALLLYNLRDFNWFKELIAQKEDGFQKQIETVK
INEMEAYTQAETCRRTILLNYFGENHDGSCHNCDICLYPPKHYDALIDAQKILSCIYRIE
QRFGSQYVVDVLRGSKRAAIIDNGHYKLSVFGIGKSESSHHWMSLIRQLIHRGYIKQNFA
TFSTLYLTEAARTIFRGESPLMMVKPSVKISNIDQQKRNAKSTLQSALLSDEERVLFASL
KKLRKTIAEREDVAPFIIFSDRTLLEMVQILPEREQDLLSVSGIGKVKLEKYGDLFLKEI
RGFINNYY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgatcaagccaaagacatattacaaaacatatttggttataaaacttttcgc
cataagcagctacaaattattgagtctataatggctggtgaagataatctagtcataatg
ccaactggtggaggaaaatcgttgtgttatcaaattccagctctgttatgttctggcata
accattgtgatttcaccattaatcgcattaatgaaagatcaagttgatcaattagcggcc
tttggaattaaagctgcttatttaaattcaatgttatctaatgaagaacagcgtgaagtt
atacgtcaatatagctgtaatgaaataaaaatgttatatattgcgccagagcgccttgta
acatcaatgttttcagcaattatacaacaatatcctcctgccttaattagtattgatgaa
gcacactgtatttcacaatggggacatgattttcgtcctgaatatctccaaattggtagt
tttaaaactagattccctcaagttcctgtaattgcattgacagcaacagccgatgagatg
actcgtaaagatatcattgaacggctcaatctaaataaccccaatattcatattagcagt
tttgatcgacccaatattcgttataccgtaatggaacgtaatgatcagatcaaacaaatt
accgatttcttagcactacaagcaggacaaagtggcattatttattgttcgagccgagct
aaagtagaaaacatggcaaccaaattatctttgaaaggattctcggtaatggtttatcat
gctggattaacacgagcagagcgcgccaaagcgcaagagcgctttttaaaagatcaaatt
caaattatgatagccacaattgcatttgggatgggaattaataaatctaatgttcgattt
gtaattcatgcggatgcacctcgtaccattgaagcctattaccaagaaaccggacgagcc
ggtagagatggtctacctgctgaggcattattactatataatttgcgcgatttcaattgg
tttaaagagttaattgcacaaaaagaagatggatttcaaaagcaaattgaaaccgtaaaa
atcaacgaaatggaagcttatacacaagcagaaacttgtcgacgaacaatattactgaat
tactttggtgagaaccatgatggttcctgtcataattgtgatatttgcctttatcctccg
aaacattatgatgccctaattgatgcacaaaaaatcttatcttgtatctatcgaattgaa
caacgttttggttctcaatatgttgtcgatgtattaagaggctctaaaagagcggcaatt
atagataatggtcactataaattatcggtatttggtattggaaaatcggaatcatctcat
cattggatgagcttaatccgacaattgattcatcgcggttatataaaacagaattttgcg
acgttctcaacattatatcttacagaagcggcaagaacgatatttcgtggagaatctcct
ttaatgatggttaaaccaagtgtaaaaatatcaaatatagatcaacaaaaacgcaacgca
aaatccacattacaatcggcattgttatctgatgaagaacgagtattgtttgcaagttta
aagaaattacgtaaaaccatcgccgaaagagaagatgtggcaccttttatcatttttagc
gatagaaccttacttgaaatggtgcagattcttcctgaaagagaacaggatcttttatct
gtaagcggaataggaaaagtaaaattggaaaaatatggtgatttattcctcaaagaaatt
cgaggttttattaataactattattga
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