Frischella perrara: FPB0191_01367
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Entry
FPB0191_01367 CDS
T03525
Name
(GenBank) Exodeoxyribonuclease I subunit C
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
fpp
Frischella perrara
Pathway
fpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FPB0191_01367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpp03400
]
FPB0191_01367
Enzymes [BR:
fpp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
FPB0191_01367
DNA repair and recombination proteins [BR:
fpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FPB0191_01367
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FPB0191_01367
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FPB0191_01367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Methyltransf_13
Motif
Other DBs
NCBI-ProteinID:
AJA45186
UniProt:
A0A0A7S7C9
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All DBs
Position
1544054..1545484
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AA seq
476 aa
AA seq
DB search
MKADIEHPNFYFHDYETFGVNPAFDRPAQFAGIRTDYNLNIIDEPTIVYCQPASDYLPSP
EAVLITGITPQFALAKGICEAEFARIIHNEFSQPNTCILGYNNIRFDDEVSRNIFYRNFY
DPYAYSWKHNNSRWDLLDVVRACYALRPEGIEWPTNDRGYTSFRLEDLTAANHINHQRAH
DAMSDVYATIEMAKLIKQHQPKLFNYFFKLRNKKLVINLIDIVNATPLVHVSGMLGSHRG
NTTLIAPLAWHPYQNDSVIICDLTGDVDSLINLSAEQIREKLYTKTADLKELESRIPLKL
IHCNKCPIIAPTNTLDSKNAKRLDIDLTLCEKNLLKIIQHLDLIQQKIIDIYNQQPSFNK
THDVDGQIYQGFFDNYDKSLCNLIQQTAPDNLSTINIEPHDLRLKMLFFRYKARNYPFSL
TEKEQLQWRDYCRDKLNHETLTHYLVELENLAIHYQLQPKKMELLKALYQYCQSIV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagatattgaacacccaaatttttacttccacgattacgagacgtttggtgta
aatccggcttttgatcgtcccgcacaattcgcaggtatcagaaccgattataatttaaat
attattgacgaaccaactatcgtttattgtcaacctgcttcagattacttgccctctccc
gaagcggtacttattacgggaataacccctcaatttgcattagctaaaggtatttgtgaa
gccgaatttgcacgtataattcataatgaatttagtcaaccaaatacttgcatcttaggc
tataataatattcgatttgatgatgaagtatcacgcaatatattttatcgtaatttttat
gacccttatgcttatagttggaaacacaacaattcaagatgggatttacttgatgttgta
agagcatgttatgcgctgcgcccagaaggaattgaatggcctacaaatgatagaggttat
accagttttcgactcgaagaccttaccgcagccaatcacatcaatcatcaacgtgcccat
gatgcgatgtctgacgtttatgctacgatagaaatggcaaaactgatcaaacaacatcaa
ccaaaattatttaattatttttttaaactcagaaataaaaaacttgtcattaacctaatt
gatatcgtaaatgctacaccattagtacacgtgtcaggtatgctaggctcacaccgtggc
aacacaaccttaattgcaccattagcttggcatccatatcaaaatgattctgtgattatt
tgtgatttaacgggggatgttgatagcttaatcaatcttagtgctgaacaaattcgtgaa
aaactctatacaaaaacggctgatctaaaggaattagaatcgcgaatacctttaaaactg
atacactgcaataaatgtccaattattgcgcctactaatacacttgattcaaaaaatgct
aaacgtttagatattgatttgactttatgtgaaaaaaacctattaaagatcatccaacat
ttagatctcatacagcaaaaaattattgatatatataatcaacaaccctcattcaataaa
actcatgatgtagatggacaaatctaccaaggtttttttgataattatgacaaatctttg
tgtaatctcattcaacaaacagcgcctgataatttatcgactattaatatagaaccgcat
gatttacggttaaaaatgctattttttcgttataaagctcgcaattatccattttcttta
accgagaaagaacagttgcaatggcgtgactattgccgggacaaactaaatcatgaaaca
ctgacacattatttagtagagcttgaaaatctagctatacattatcaattacaacctaaa
aaaatggaattgctaaaagcgctttatcaatactgccaaagtattgtttag
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