Frischella perrara: FPB0191_01399
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Entry
FPB0191_01399 CDS
T03525
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fpp
Frischella perrara
Pathway
fpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FPB0191_01399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpp03400
]
FPB0191_01399
Enzymes [BR:
fpp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FPB0191_01399
DNA repair and recombination proteins [BR:
fpp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FPB0191_01399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
DEAD
Herpes_Helicase
FtsK_SpoIIIE
T2SSE
AAA_28
AAA_24
Mg_chelatase
PhoH
AAA_16
UvrD_C
NPHP3_N
TrwB_AAD_bind
AAA_7
Rad17
Zeta_toxin
AAA
SRP54
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AJA45218
UniProt:
A0A0A7S174
LinkDB
All DBs
Position
complement(1586925..1588853)
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AA seq
642 aa
AA seq
DB search
MMTGNDLLELLKSNGIITALDFYLANFLHQKANINDPQANRRFAFLLAWLSLEVRSGHVC
IDLTQLTKKQFDYRIGRELSDSIFTDLDKPKLTDWLKLCAEISHDIISDGQNLTPLILCS
NRLYFQRMWLYEKRVAQYFALNQHSYHFEDKTSVCSLIDTLFPSTNSVEIDWQKVAVVSA
LTHKIAIISGGPGTGKTTTISKLLTALLTINHENTLTNLRIVATAPTGKAAARLTESLSS
ALSSLTIADPIKSSLPTEAITLHRLLGARPNSNQYLYNEHNLLNIDLLLIDEASMVDLSM
MAKIINALPEHCRLILLGDKEQLSSVEAGAVFADLCQMMEQGYSQNHIDTIYEICQYRLE
SNTQHQANFADCVCLLQKSYRFNLNSGIGVLANYIKEGQNEAIELLFKQNKHHDIVLNPL
VDENHYIKAIQHTVSYYSHYLLQILKYPTKIQHILTCFAEFRLLCALREGRYGVSGLNKI
IEQELEKQNIIHRNKNQAWYVGRPIMILRNSFSLGLFNGDIGITLPDPHNKDKLRVYFSL
PSGEIKGFAPYRLPEHETAYAMTIHKSQGSEFDHISIILPTEYSPLLTRSLLYTAVTRAK
KNVAIFADNQILSRTVLSKTQRQSGLLYELENITANLNKVAE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccggaaacgatttattagagcttttgaaatctaatgggattattactgcatta
gatttctatcttgccaattttctacatcagaaagcaaatataaacgatccacaggccaat
cgtcggtttgcctttcttctagcttggctaagtctcgaagttaggtctggtcatgtgtgc
attgatttgacacaattaactaaaaaacaatttgactatcgcattggtcgggaattatca
gattctatattcaccgatttagataaaccgaaattaacggattggttaaaattatgtgcg
gaaattagtcatgatattattagcgatggtcaaaacttaacgcccctaatattatgttcc
aatcgactctattttcaacgaatgtggctatatgaaaaacgagttgcacagtattttgct
ttgaatcaacattcatatcatttcgaggataaaactagcgtttgttcgttaatagatacg
ctttttccaagtacaaatagcgttgagattgattggcaaaaggtagcagttgtttcagca
ttaactcacaaaatagctattatatcgggaggaccgggtacaggtaaaacaacaacgatc
agtaaattactcactgctttacttacgattaatcatgaaaatactttaacaaatttacgt
attgtagcaactgcaccgacaggaaaagccgctgctagattaaccgagtctttaagttcg
gcattatcaagcttgactattgctgatcctattaaatcaagtttaccaacagaagccatt
acacttcaccgtttgttaggtgctcgtccaaatagtaatcaatatctctataatgagcat
aacttattaaatattgatcttctgttaattgatgaagcttcaatggtcgatttatctatg
atggctaagattattaatgcattaccagagcattgtcgacttatcttattaggtgataag
gaacaactttcttcagttgaagccggggcagtttttgcagatctatgtcaaatgatggaa
cagggatacagtcaaaatcacattgatacaatttatgaaatttgccaatatcgtttagaa
tccaatacgcagcatcaagcaaactttgctgattgcgtatgtttattacagaagagttat
cgttttaatctaaattctggtattggtgttttagctaattacatcaaagaaggacaaaat
gaagcgatagaactattatttaaacagaataaacatcatgatattgttctaaatccgtta
gttgatgagaatcattatatcaaagcgattcagcatacagtgtcctattatagtcattat
ttattgcagattttaaaatacccaacaaaaatccaacatatattaacttgttttgccgaa
tttcgcttactttgtgctttaagggaagggcgatatggtgtttcaggtttaaataaaatt
attgaacaagaattagaaaaacaaaatattattcatcgcaataaaaatcaagcttggtat
gttggaagacccatcatgatattacgtaatagtttctcattaggtttgtttaatggtgat
attggtattacattgcctgatccccataataaagataaattaagagtttatttttcttta
ccgagtggggaaattaagggatttgctccttatcgtttaccagaacatgaaacagcttat
gctatgacaatacataaatctcaaggttcagagttcgatcatatcagtattattttgcct
acagaatattcaccattattaacacgatcactattatatacagccgtaacacgtgcgaaa
aagaatgtggctatttttgccgataatcagatcctatctcggactgtactgagtaaaact
caacgtcaaagtggattattatacgaattagaaaatataacagcaaacctcaacaaggtg
gctgaatag
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