Frischella perrara: FPB0191_02323
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Entry
FPB0191_02323 CDS
T03525
Name
(GenBank) DNA-directed DNA polymerase III (polc)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fpp
Frischella perrara
Pathway
fpp03030
DNA replication
fpp03430
Mismatch repair
fpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPB0191_02323
03430 Mismatch repair
FPB0191_02323
03440 Homologous recombination
FPB0191_02323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpp03032
]
FPB0191_02323
03400 DNA repair and recombination proteins [BR:
fpp03400
]
FPB0191_02323
Enzymes [BR:
fpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPB0191_02323
DNA replication proteins [BR:
fpp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPB0191_02323
DNA repair and recombination proteins [BR:
fpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPB0191_02323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MeaB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AJA46126
UniProt:
A0A0A7S9V6
LinkDB
All DBs
Position
complement(2673444..2676929)
Genome browser
AA seq
1161 aa
AA seq
DB search
MSDPKFIHLHVHSDFSMLDGMAKTDALVKQTVAMNMPALAITDFSNLCGLVKFYGSALSK
GIKPIIGADLKIHDVERDEFYDITVLAANNEGYHNLTLLISHAYQRGYVGDGPVVDKEWL
IKYKTGLIILVSYRSDIGLGVIRDNQAMIMESIQFYQTHFADACYLELIRTGRENEELFV
KQALKLAEQHDLPVVATNDVRFLSASDFEAHEIRVAIHDGDTLDDPKRPKKYSLQQYFRS
ESEMVELFSDIPESLINSVEIAKRCNVSIRLGEYFLPQFPTGEMTTEDFLIHKAQQGLEE
RLQFLFPDPDIRQANRHKYDERLAIELDVINQMGFPGYFLIVMEFIQWSKDNSVPVGPGR
GSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDKRDLVIDHVAEMY
GRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPRLL
ELYNNNEDVKGLIDIARQLEGVTRNAGKHAGGVVISPTKITDFAPIYCDAEGHHPVTQFD
KNDVEYAGLVKFDFLGLRTLTIIDWAISMINERLQREGNPPVDINRIPLDDKDSFDLLLN
AETTAVFQLESRGMKDLIRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGLEEVS
YPDSQYQHESLKPILEPTYGIILYQEQVMQIAQTLAGYTLGGADLLRRAMGKKKPEEMAK
QRSVFKEGAEKQGINGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPAEF
MAAVMTADMDNTDKIVGLVDECLRMGIKVNPPDINSGLYHFHVNDKGEIVYGIGAIKGVG
EGPIEAIVEARNKQGKQGYFRNIFELCAKTDIKKLNRRVLEKLTMAGAFDKIGPHRAAIL
HSINDAIQAADQHAKAQDIGQEDMFGVLAEEPEQVEYAYGNVPKMPEQILLDGEREALGL
YLTGHPVTQYLKELSRYTNGARISEATPTGWGKMATFAGLVITARIRLTKKGNRIGLFTL
DDRSGRIEVMVFGETLEKFEHHIVQDKILIVTGQVSTDDFNGGVKLAAREIVELSEAREK
YVKGLGISLRDSEVNRLFLQQLQKNVEPHRNGVIPVNVYYQTDQARVRIQFGTTWRVTPN
DNLLISLKSLLGNERVELEFD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcctaagtttatacatctccatgttcatagtgatttttccatgttagatggc
atggcaaaaacggatgcattagtcaaacagacggttgcaatgaatatgcctgcacttgcc
ataacggatttttctaatctgtgtggattagtaaaattttatggcagtgccttgtctaaa
ggtattaaaccgatcattggtgctgatctgaaaatacatgatgtagaacgtgatgagttt
tatgatattacagttttagcagctaataatgaaggttatcacaatttaactttactgatc
tcacatgcttaccaacgaggttatgttggtgatggtcctgttgttgataaagagtggctt
attaaatataaaactggcttaattatccttgtcagttatcgaagtgatattggtttaggg
gtcattcgcgacaatcaagcaatgataatggaatctatccaattttatcaaacgcatttt
gctgacgcttgttatctggagttaattcgtactgggcgcgaaaatgaagagctatttgtt
aagcaagcgcttaaattagctgaacaacatgatctaccggttgttgctactaacgatgtc
agatttttatctgcaagtgattttgaagcccatgaaattcgtgtagccattcatgatggc
gataccttagatgatcctaaacgccctaaaaaatattcattacaacaatattttcgtagt
gaatcggaaatggttgaacttttttctgatattcccgagtcgctaattaatagtgttgaa
attgccaaacgatgtaatgtttcaatccgtttaggtgaatatttcttaccgcaatttcca
acgggtgaaatgaccacggaggattttttaattcataaagcgcaacaaggacttgaagag
cgtttacaatttttatttcctgatccagatattcgccaagctaatcgccataaatatgat
gaacgtctagcgatagagttagacgtgataaaccaaatgggtttccccggttacttctta
attgtgatggaattcatccaatggtctaaagataattctgtacctgttggaccgggtcga
gggtcaggtgctggatcactggttgcgtatgcacttaaaattaccgatctcgatcccctt
gagtttgatttactatttgaacgttttttaaatccagaacgtgtatctatgcccgacttt
gatgttgatttctgtatggataaacgtgatttagttattgatcacgttgcggaaatgtat
ggacgtgatgccgtatcacaaatcatcacctttggtactatggctgcgaaagcagtaatt
cgagatgttggacgggtattaggtcatccatatggatttgtggatcgcatatcgaaatta
attccacctgatcccggtatgacactcgcaaaagcctttgaggctgaacctcgattactt
gagctttataataataatgaagatgttaaagggctcattgatattgcccgtcaattagaa
ggagtcacgcgtaatgctggtaaacatgctggcggggttgttatctcgccaactaagatt
acggattttgcaccgatttattgtgacgccgaaggtcatcatccggtaacgcaatttgat
aaaaatgatgttgagtatgctgggctagttaaatttgactttttaggtttacgaacatta
acaatcattgattgggcaatatcaatgattaatgaacgtttacaacgagaaggcaatccc
cctgttgatatcaatcgaattcctcttgatgataaggattcatttgatttattactaaat
gctgaaactaccgctgtcttccagttggaatcgcgagggatgaaggacttaatccgacga
ctcaaacctgactgttttgaagatatgatcgctctggtagcactgtttcgaccgggtcct
ttgcaatcaggcatggtagataactttattgatcgtaaacatggattggaagaggtatct
taccctgatagccaatatcaacatgaatctttgaaaccaattttagaaccaacttatggc
atcattctttatcaagaacaggtcatgcaaatagcccaaacgctggctggctatacactt
ggtggcgctgatttattacgtcgcgctatgggtaaaaagaagcccgaagaaatggctaaa
caacgttcggtatttaaagaaggggcggaaaaacagggtataaatggcgaattatcaatg
aaaatttttgatttagttgagaaattcgctggctatggattcaataaatcacactctgca
gcttatgcgttagtatcttatcaaactttatggcttaaaacccatttcccagcggaattt
atggcagcggttatgaccgctgatatggataatacggataaaatcgttggtcttgttgac
gagtgtttaagaatggggattaaagtcaatcctcctgatattaatagcggtttataccat
ttccatgtaaatgataaaggtgaaattgtctatggtatcggagcgattaaaggtgtgggt
gaaggacctattgaagctattgttgaagcgcgcaataagcaaggtaaacaaggttatttt
agaaatatcttcgaattatgtgcaaaaacggatattaaaaagctgaatcggcgcgtctta
gaaaaactcactatggcaggggcatttgataaaatcggtcctcatcgggcagccatatta
catagtattaatgacgcaattcaagcggcagatcaacatgctaaagcgcaagatattgga
caggaggatatgtttggtgtgttagctgaagagccagaacaagttgaatatgcttatggc
aatgtgccgaaaatgccagaacagattctattagacggtgagcgtgaagcacttggtcta
tatttaacgggacaccctgtgacgcaatatcttaaagagctaagtcgttataccaatggc
gctagaatcagtgaggcaacgccaaccggttggggtaaaatggcaacatttgccggactg
gtgattacggcacggattcgtctgaccaaaaaaggtaatcgaataggtttatttacgctt
gatgaccgttcagggcgcattgaagtgatggtttttggtgaaacccttgagaaatttgaa
catcacattgtacaagacaagatattaattgttaccgggcaagttagtactgatgatttt
aatggcggagtcaaacttgctgccagagaaattgtcgaacttagcgaagcgcgcgaaaaa
tatgttaaagggttaggcatttctttacgagactctgaagttaatcgacttttcctacaa
caattacaaaaaaatgtcgagccacatcgtaatggcgtgattccggttaatgtttattat
cagactgatcaagctagagtacgcattcaatttggcacaacttggcgtgttacacccaat
gataatttactcattagtttaaaaagtttactaggcaatgagcgagtagagttagagttt
gattaa
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