Flavobacterium psychrophilum 950106-1/1: IB65_02235
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Entry
IB65_02235 CDS
T03412
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
fpq
Flavobacterium psychrophilum 950106-1/1
Brite
KEGG Orthology (KO) [BR:
fpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpq03021
]
IB65_02235
03009 Ribosome biogenesis [BR:
fpq03009
]
IB65_02235
Transcription machinery [BR:
fpq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IB65_02235
Ribosome biogenesis [BR:
fpq03009
]
Prokaryotic type
rRNA transcription factors
IB65_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AIT64761
UniProt:
A0A075S476
LinkDB
All DBs
Position
506154..507395
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AA seq
413 aa
AA seq
DB search
MENLALIDSFSEFKDDKSIDRPTLMAILEDVFRNALKKKYGSDDNFDIIINPDKGDMEIW
QRRVIVADDDLDLDHLEITLTDARKIEPDFEIGEEVSEEVKLIDLGRRAILALRQNLISK
IHEHDNTNLYKQFKDLIGDIYTGEVHHVRPRVVILVDDEGNEIILPKEKQIPSDFFRKGD
NVRGIIESVELKGNKPQIIMSRTSEKFLEKLFEQEIPEVFDGLIMVKNVVRIPGEKAKVA
VDSYDDRIDPVGACVGMKGSRIHGIVRELGNENIDVINYTTNTQLYITRALSPAKVSSIK
INEETKRAEVFLKLEEVSKAIGRGGHNIKLAGQLTGYELDVIREGTVAADDDVELTEFSD
EIEAWVIEEFAKIGLDTAKSILSQDVNDLVRRTDLEEETILEVVKILKEEFEE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggagaatttagcattaatagattcattttcagaatttaaggacgacaaatcgatagat
cgtccaacgctcatggcgattttagaagatgtgtttagaaacgcattgaagaaaaaatac
ggttcagacgataattttgatatcattattaatcctgataaaggagatatggaaatctgg
caaagaagagtaattgtagccgatgatgatttagatttagatcaccttgaaattacactt
accgatgcaagaaaaatagagccagatttcgaaattggtgaagaagtatctgaagaagta
aaattaatagacctaggaagaagagccattttagcattacgccaaaatcttatttcaaaa
attcacgaacatgacaatacaaatctttacaaacaatttaaagatttaattggagatata
tacactggagaagttcatcacgtgcgtccaagagtagtaatacttgtagatgacgaagga
aatgaaattattttaccaaaagaaaaacaaatcccgtctgactttttccgtaaaggagat
aacgttcgtggaattattgaaagtgtcgaactaaaaggaaataagcctcaaattattatg
tctagaacctcagaaaagtttctagaaaaattatttgagcaagaaataccagaagtattc
gacggattaatcatggtaaaaaatgttgttcgtattcctggtgaaaaagcaaaagtagct
gtcgattcttacgatgatcgtatagacccagtaggtgcttgtgtgggaatgaaaggatca
cgtattcacggaattgttcgcgaattaggaaacgaaaatatagacgtaattaactatacg
actaacactcaattgtatattacaagagcactaagtccagcaaaagtatcttctattaaa
ataaatgaagaaacaaaacgtgccgaagttttcttgaaattagaagaagtttcaaaagca
attggtcgtggcgggcacaacatcaaactagcaggtcagttaactggttatgagcttgat
gtaattagagaaggaaccgtagcggcagatgatgatgtagaattaacagaattctcagac
gaaattgaagcttgggttatcgaagaatttgcaaaaattggcttagacactgcaaaaagt
atcctaagtcaagatgtaaacgacttggtaagaaggactgatttagaagaagaaactatt
ctcgaagtagttaaaatattgaaagaagaatttgaagagtaa
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