Flavobacterium psychrophilum 950106-1/1: IB65_03675
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Entry
IB65_03675 CDS
T03412
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fpq
Flavobacterium psychrophilum 950106-1/1
Brite
KEGG Orthology (KO) [BR:
fpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpq03032
]
IB65_03675
03400 DNA repair and recombination proteins [BR:
fpq03400
]
IB65_03675
Enzymes [BR:
fpq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IB65_03675
DNA replication proteins [BR:
fpq03032
]
Prokaryotic type
DNA Topoisomerases
IB65_03675
DNA repair and recombination proteins [BR:
fpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IB65_03675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIT65019
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Position
811181..813796
Genome browser
AA seq
871 aa
AA seq
DB search
MSTGEKLIPINIEDEMKTAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMYDLGITSKS
AHKKSARIVGEVLGKYHPHGDRSVYDAMVRMAQEWSLRYLLVDGQGNFGSVDGDSPAAMR
YTEARMRKISEEIMADIEKETVDFQLNFDDTLYEPKVMPTKVPTLLINGATGIAVGMATN
MPPHNLTEVINGTLAYLENNDIEIDELMQHIKAPDFPTGGIIYGYEGVREAFKTGRGRIV
MRAKVGFEEVDGRECIIVSEIPYQVNKADMIKRTADLVNEKKIEGISNIRDESDRNGMRI
VYILKRDATPNVVLNTLYKYTQLQSSFSVNNIALVKGRPQMLNLKDLIHYFVEHRHDVVV
RRTKFDLRKAEERAHILEGLIIASDNIDEVIALIRSSKNTDEAKEKLIERFKLSDIQSRA
IVEMRLRQLTGLEQDKLRAEYEELMKLIEHLKALLADVNLRTALIKEELEDMRAKYGDER
RSQIEYSGGDVSIEDLIADENVVITISHAGYIKRTNLNEYKTQNRGGVGQKSAGTRDADF
LEHMYVATNHQYMMFFTQKGKCYWMRVYEIPEGSKTAKGRALQNLINIESDDKVKAFICT
QDLKDKDYTTSHNLIMVTKKGMVKKTSLDKYSKPRVNGVAAITIKEGDELLSAQLTDGNS
QIIIAVKSGKLLRFEETKTRPMGRTASGVRGIRLKDESDEVIGLVSVNDMNSEILVVAEN
GYGKRSSLDEYRITNRGGKGVKTLNITEKTGQLISINTVTDADDLMIINKSGLTIRMAVE
DLRVMGRATQGVKLINLKGKDSIAAVTKVMKDDVEEILLDEDGNVIESVIERVKPVLEVL
EDDGTADDDDDDEDSDDDDSEEEEDDSDDEA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaggagaaaagttaattccaattaacattgaagacgaaatgaaaacagcttac
atcgattattcgatgtcagttattgtatcgcgtgccttacctgatgtaagagatggttta
aaaccagttcacagaagggttttgtatggtatgtatgatttaggaataacttcaaaatct
gcccacaagaaatctgctagaattgtaggagaagtattgggtaaatatcacccacacgga
gatagatcagtatatgatgccatggttcgtatggcccaagaatggtctttgcgttattta
ttagtagatggtcaaggtaattttggatctgtagatggagatagtccagcagccatgcgt
tatacagaagctagaatgcgtaaaatttcggaagaaattatggccgatatcgaaaaagaa
acggtcgattttcagttaaattttgatgatactttatacgagccaaaagtaatgcctact
aaagttcctactttattaataaacggagccacaggaattgcagtgggtatggcaacaaat
atgccaccacacaatttaacagaagttattaacggtacgttagcttatcttgaaaacaac
gatatcgagattgatgagttaatgcaacatattaaagcaccagattttcctactggcggt
atcatatacggatacgaaggggtgcgtgaagcatttaaaacaggtcgtggtcgtattgta
atgcgtgcaaaagttggttttgaagaagtagatggtcgtgaatgcattatcgtgagcgag
attccttaccaagtgaataaagccgacatgattaaacgtactgccgatttagttaatgag
aaaaaaatagaaggaatatccaatattcgtgacgaatccgatagaaacggtatgcgtatc
gtatatatcttaaaacgtgatgcaacaccaaacgtagtattaaacacattatataaatat
acgcaattacaatcttccttttctgtaaataatattgcattagtaaaaggtcgtccgcaa
atgttaaatctgaaagatttaattcattattttgtagaacaccgtcatgatgtagtagtt
cgtagaacaaaattcgatttaagaaaagcagaagaaagagcacatatattagaaggacta
atcattgcatcagacaatattgatgaagtaattgctttaattcgtagttctaaaaacaca
gatgaagctaaagaaaaattaatcgaaagatttaaactatctgatattcagtcacgtgct
atcgtagaaatgcgtttgcgtcagcttacaggtctagaacaagacaagttaagagccgag
tatgaagagttaatgaaattgatcgagcatttgaaagctttgcttgccgatgtaaaccta
agaaccgcattaataaaagaagaattagaagatatgcgtgccaaatacggtgacgagcgt
cgttctcaaattgaatattctggtggcgatgtaagtattgaagatttaattgccgacgaa
aatgtagttattaccatttctcatgcaggttatatcaaacgtacaaaccttaatgaatac
aaaacgcaaaacagaggaggcgtaggtcaaaaatctgcaggaactcgtgatgccgatttc
ttagaacacatgtatgtggctacaaaccaccaatatatgatgttctttactcaaaaagga
aaatgctattggatgcgtgtttacgaaattcctgaaggcagtaaaacagcaaaaggacgt
gctttacaaaacttgattaatatagaaagtgatgacaaagtaaaagcatttatatgtact
caagatcttaaagataaagactatacgactagccataatttgattatggtgaccaaaaaa
ggaatggttaagaaaacatctttagataaatattctaaaccacgtgtaaatggtgttgca
gctattactatcaaagaaggagatgaattattatcagcccaattaacagacggaaatagt
caaataatcatagcggttaaatcaggaaaattactccgttttgaagaaactaaaacccgt
cctatgggaagaacagcttctggagtacgtggaattaggcttaaagatgaatctgatgaa
gtaatcggattggtgtctgtaaacgacatgaatagcgaaattctcgtagtggccgaaaac
ggatacggaaaacgatctagtctcgatgaatacagaattacaaaccgtggtggaaaaggg
gtaaaaactttaaatattaccgaaaaaacaggacaactaatctccattaatacagttacc
gatgccgatgatttaatgattattaataaatctggattaaccataagaatggctgtagaa
gacttacgtgtaatgggacgtgcaacacaaggcgtaaaactaattaatctaaaaggaaaa
gactctatcgcagccgttacaaaagtaatgaaagacgatgtagaagaaatcctacttgat
gaagacggaaacgttatagaatcagtcatcgaaagagtaaaaccagtattagaagttctt
gaagatgacggaacagcagacgatgatgacgatgatgaggattcagacgacgacgattcg
gaagaagaggaagatgattctgacgacgaagcataa
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