KEGG   Flavobacterium psychrophilum 950106-1/1: IB65_04335
Entry
IB65_04335        CDS       T03412                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fpq  Flavobacterium psychrophilum 950106-1/1
Pathway
fpq03030  DNA replication
fpq03430  Mismatch repair
fpq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IB65_04335
   03430 Mismatch repair
    IB65_04335
   03440 Homologous recombination
    IB65_04335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpq03032]
    IB65_04335
   03400 DNA repair and recombination proteins [BR:fpq03400]
    IB65_04335
Enzymes [BR:fpq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IB65_04335
DNA replication proteins [BR:fpq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IB65_04335
DNA repair and recombination proteins [BR:fpq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IB65_04335
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: AIT65130
UniProt: A0A076NW45
LinkDB
Position
complement(963201..963767)
AA seq 188 aa
MLDWLKKIGKDYPEFWKNYLVQFEMQTERKVALYIETTGINPAKDKIISIGAIAIEKNQI
RIDNCLEIELNKAEILEGKDFSYQEIQAIESLINFIGNATLVGHRIHYDIQIINEYLHKL
QSGRIKNNLLDVEVMHGRIIDQNAKQFSLTELLSIYKIDSPHIPTSANMAFSIALLFLKL
KSRLKMTN
NT seq 567 nt   +upstreamnt  +downstreamnt
atgctcgattggttaaaaaaaataggcaaagattacccagaattttggaaaaattacctt
gttcagtttgaaatgcaaaccgaaagaaaagttgcattatatatagaaacaacgggaata
aatccagctaaagataaaattatatctattggcgccattgccatcgaaaaaaatcagatt
cgtatagacaattgtttagaaatagaactaaataaagccgagatattagaaggtaaagac
tttagttaccaagagattcaggctatagaatccttaataaattttataggaaatgcaact
ctggtagggcatcgcattcattatgacattcaaattattaatgagtatttgcataaattg
cagagtggtcgcattaaaaataacttgctagatgttgaagtgatgcatggcaggattatt
gaccaaaatgctaaacaattttcattaaccgaattgttatcaatttataaaattgattct
ccacatattcctacatcggcaaacatggcattttcaatagctttgctgtttttgaaatta
aaaagcagattaaaaatgactaattaa

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