KEGG   Flavobacterium psychrophilum 950106-1/1: IB65_08560
Entry
IB65_08560        CDS       T03412                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
fpq  Flavobacterium psychrophilum 950106-1/1
Pathway
fpq00061  Fatty acid biosynthesis
fpq00071  Fatty acid degradation
fpq01100  Metabolic pathways
fpq01212  Fatty acid metabolism
fpq02024  Quorum sensing
fpq04146  Peroxisome
Module
fpq_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:fpq00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    IB65_08560
   00071 Fatty acid degradation
    IB65_08560
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    IB65_08560
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IB65_08560
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:fpq01004]
    IB65_08560
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fpq04147]
    IB65_08560
Enzymes [BR:fpq01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     IB65_08560
Lipid biosynthesis proteins [BR:fpq01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   IB65_08560
Exosome [BR:fpq04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   IB65_08560
  Exosomal proteins of breast cancer cells
   IB65_08560
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 Phage_pRha
Other DBs
NCBI-ProteinID: AIT65905
UniProt: A0A076P1I2
LinkDB
Position
1833988..1835760
AA seq 590 aa
MTKITRLFDFPYYQLDKQNLPDALVTKYDGVWVKTSTQEYINKANTISRALLRLGIQKND
KIALISTNNRTEWNIMDIGILQTGAQNVPIYPTISEDDYQYILNHCEAKYCFISDAEVLR
KINMIKNNVPTLKEIFSFNDIEGCKNWNELLTLGSDKSNQNEVEERKKAVLTTDLATIIY
TSGTTGKPKGVMLSHQNIVSNALDSSNRIPFEEGTSKGLSFLPICHIFERMILYLYQYYG
VAIYFGESIEKISDNIKEVKPTVMTVVPRLLEKVYDKIYTKGSELTGIKKNLFFWAIDLG
LRYEPYGANGFWYEIQLKIARKLIFSKWKEGLGGNLDLMVSGSAALQPRLTRIFAAAGIP
VMEGYGLTETSPVISVNDMRNKGFKIGTVGKVIDKLDVKIGPDGEILCKGTNVMMGYYKD
EAQTKEVIKEGYFHTGDIGEFDNEGFLKITDRKKEMFKTSGGKYIAPQLLENTMKQSRFI
EQIMVIGDGQKMPAAFIQPNFDFVKEWGVLHQVTLGNTNEEIIANPKVIERIQQEVNSLN
EKFGNWEKIKRFELTPDLWTITDGHLTPTLKLKRKIILEKYQKLYEKIYN
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgaccaagatcacaagattattcgacttcccttattaccaactagataaacaaaatttg
cccgatgctttagtaacaaagtatgacggcgtttgggtaaaaacttcgacacaagaatat
ataaacaaagcaaataccatttcgagagcgctacttcgattgggaatacaaaaaaatgat
aaaattgctctaatatcaaccaataatagaaccgaatggaatattatggatattggtatt
ttacaaactggtgcgcaaaacgttcctatatatcctactatttctgaagatgattatcag
tatattttaaaccattgtgaagcaaaatattgttttatttctgatgccgaagtacttcgg
aaaataaacatgattaaaaacaatgtaccaacacttaaagaaattttctcttttaatgat
attgaaggctgcaaaaattggaacgaattgctaacccttggttcagacaaatcgaaccaa
aacgaagtagaagaaagaaaaaaagcagtattaaccactgatttagcaaccattatttac
acctcgggaactactggaaagccaaaaggcgtcatgctttctcaccaaaatatagtttcg
aatgctttagatagctcaaacagaatcccttttgaagaaggcacaagtaaaggactaagt
tttttaccaatttgtcatatctttgagcgaatgattctttatttataccaatactacgga
gtggcaatatattttggagaatctatcgaaaaaattagcgacaatataaaagaagttaaa
ccaacagtaatgacggttgttcccagacttttagaaaaagtctatgacaaaatatacacc
aaaggttctgaactcacaggaataaaaaagaatcttttcttttgggcaatcgatctggga
ttacgatacgaaccttacggagcaaacggattttggtacgaaatacaattaaaaattgca
cgaaaacttattttcagcaaatggaaagaaggattaggaggtaatttagaccttatggtt
tctggaagcgcagccctacaaccaagattaactagaatttttgccgccgcaggaattccc
gtcatggaaggttatggcttaaccgaaacatcaccagttatatcagtaaatgatatgcgc
aacaaaggattcaaaataggaactgttggcaaagtaatagacaaattagacgtaaaaatt
ggaccagatggagaaatcctttgcaaaggaacaaatgtcatgatgggctattataaagac
gaagcacaaacaaaagaagttatcaaagagggttattttcatacgggagatattggagaa
tttgacaacgaaggattcctgaaaattaccgatcggaaaaaagaaatgtttaaaacctct
ggcggaaaatatatcgcaccacaattactagaaaacaccatgaaacaatcccgttttata
gagcaaattatggtaattggtgatggtcagaaaatgccagcagcattcatacaacccaac
ttcgattttgtaaaagaatggggcgttttgcatcaagtaactttaggaaatacaaacgaa
gaaataattgcaaacccaaaagttatcgaacgcattcagcaagaagtaaattcattaaac
gaaaaatttgggaattgggaaaaaataaaacgatttgaacttacaccagatttatggacc
attaccgatggtcatctcacaccaacattaaaactaaaacgaaaaataatcttagagaaa
taccaaaaactatacgaaaaaatttacaattaa

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