Flavobacterium psychrophilum 950106-1/1: IB65_11330
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Entry
IB65_11330 CDS
T03412
Name
(GenBank) recombinase RecA
KO
K03553
recombination protein RecA
Organism
fpq
Flavobacterium psychrophilum 950106-1/1
Pathway
fpq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IB65_11330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpq03400
]
IB65_11330
DNA repair and recombination proteins [BR:
fpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IB65_11330
RecFOR pathway proteins
IB65_11330
TLS (translesion DNA synthesis) factors
Other SOS response factors
IB65_11330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecA_N
RecA_C
ATPase
Rad51
MT3502_N
AAA_25
ATPase_2
AAA_24
AAA_16
AAA_22
AAA_35
ABC_tran
TK
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AIT66400
LinkDB
All DBs
Position
2425824..2426828
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AA seq
334 aa
AA seq
DB search
MSTEKEAKLKALQLTLDKLDKTYGKGTVMKMGDKAVEEVETISSGSLGLDLALGVGGYPR
GRVIEIYGPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRSYAEKLGVDIENLIISQ
PDNGEQALEIAENLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKL
TGTISKTKCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDGENVL
GNRTKVKVVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFEVIRKAGSWFSYGDTKL
GQGRDAVKGLIKDNPELADELEVKIKDLIKESNK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaaaaagaagccaaactaaaagcattacagcttacattagataaattagac
aagacttacggcaaaggaaccgtaatgaaaatgggcgataaagctgtagaagaagtagaa
acaatttcttcaggatcattaggattagacctagccttaggagttggcggatatcctcgt
ggtcgtgtaattgaaatatacggaccagaatcatcaggaaaaacaaccttaaccctacac
gctattgccgaagcccaaaaagcaggaggaattgccgctttcatagatgcagaacacgcc
ttcgatagaagttatgccgaaaaattaggtgttgatatcgaaaatttaatcatttcccaa
ccagataacggggagcaagctttagaaatcgccgaaaacttaatacgttcaggagcaata
gatattgttgtaatcgattcagttgcagcacttaccccaaaaagcgaaattgaaggcgaa
atgggagattctaaaatgggtcttcatgcacgattaatgtcgcaagccttaagaaaacta
acaggaacaataagcaaaacaaaatgtaccgtatttttcatcaatcagttaagagaaaaa
ataggtgttatgttcggaaatcctgaaacaacaacaggaggaaatgcgttaaaattttac
gcctcggttcgtttagatattcgccgttcgacacaaataaaagacggtgaaaacgtacta
ggaaatagaaccaaggtaaaagtggtaaaaaacaaagtagcgccaccttttaaaactgcc
gaattcgatattatgtatggagaaggagtatctaaaacaggcgaaatacttgacttagct
gtagaattcgaagttattcgaaaagcaggatcgtggtttagctacggagacacaaaatta
ggacaagggcgtgacgccgtaaaaggactaataaaagacaatccagaattagcagacgaa
cttgaagtaaaaataaaagaccttatcaaagagtctaataaatag
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