Faecalibacterium prausnitzii L2-6: FP2_02190
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Entry
FP2_02190 CDS
T02591
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fpr
Faecalibacterium prausnitzii L2-6
Brite
KEGG Orthology (KO) [BR:
fpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpr03032
]
FP2_02190
03400 DNA repair and recombination proteins [BR:
fpr03400
]
FP2_02190
Enzymes [BR:
fpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FP2_02190
DNA replication proteins [BR:
fpr03032
]
Prokaryotic type
DNA Topoisomerases
FP2_02190
DNA repair and recombination proteins [BR:
fpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FP2_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
Zn_ribbon_ACC
bpX6
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CBK97904
UniProt:
D4K311
LinkDB
All DBs
Position
195199..197286
Genome browser
AA seq
695 aa
AA seq
DB search
MAKLVIVESPAKAKTIGKYLGKDYEVTASMGHIRDLPASQLGIDIEHDYAPQYISIKGKE
KLIKELKSKAKHSDGVLLATDPDREGEAISWHLANILGLDPHEPNRVTFDEITKRGVKEG
MAHPRAINEDLFNAQQARRVLDRLVGYKLSPFLWRKVRRGLSAGRVQSVAVRIIDDREKE
IEAFKPEEYWNVDATLGVGRKSFTARLASDDKGKKLLPHSEAEARAIEKGLEGAEYTVGE
LKKGKRAKQPTPAFITSTLQQEASRRLGFTATRTMRAAQTLYEGVDIAGHGTMGLITYMR
TDSLRISDEAVAAAREYIAGAYGESYICPYKRTWKTKSATAAQDAHEAIRPSVPGLTPDE
VDKSISGDTAKLYRMIWSRFMASQMADCQQDTVSVTVYAGGYRFKASGYTVTFDGFTALY
EEATDEKEKKETSLPPLEEGQVLKLRELKSEQKFTQPPARYTEATLIKALEENGIGRPST
YAPIITTIIDRGYVEREQKKLKPTLLGRAVDGLMLEQFPHIVDVDFSAEMEKNLDKVESG
KTDWHKTVDDFYKGFAASLEQAEKNMEGKKVKVPDEPSSEVCDLCGRPMVIKVGKYGKFL
ACSGFPECRGTKRLVKDTGGICPKCGKGRMLERKSAKGRIYYGCERYPDCDFMTWDMPVA
VKCEKCGSTLFRKGSKLYCAKEGCDFEMPVPKKSD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactcgtcatcgtggagtcgcctgccaaggcgaagaccatcggcaaatatctg
ggcaaagactacgaagttacggccagcatgggccacatccgcgatctgcccgcctcccag
ctgggcatcgacatcgagcatgactatgcgccgcaatacatcagcatcaaaggcaaggaa
aagctcatcaaagagctgaagagcaaggccaagcactccgacggtgtgctgctggcgacc
gacccggaccgtgaaggcgaagccatcagctggcatctggccaacatcctgggcctcgac
ccccacgagcccaaccgcgtgaccttcgacgagatcaccaagaggggcgtgaaggagggg
atggcccacccccgcgccatcaacgaagacctcttcaacgcccagcaggcccgccgtgtg
ctggaccgtctggtgggctataagctgagccccttcctgtggcggaaagtccggcgcggt
ctgtcggcgggccgcgtccagagcgtggccgtccgcatcatcgacgaccgcgagaaggag
atcgaagccttcaagcccgaggaatactggaacgtggacgccaccctgggcgtgggccgg
aagagctttacggcccgtctggcctccgacgacaagggaaaaaagctcctgccgcactct
gaggccgaggcccgcgccatcgaaaagggcctcgagggggccgagtacaccgtgggcgaa
ctgaaaaagggcaagcgcgcgaagcagcccaccccggccttcatcaccagtaccctgcag
caggaggcatcccgccgtctgggcttcacggccacccgcaccatgcgggctgcccagacg
ctgtacgaaggcgtggacatcgccggccacggcaccatgggcctcatcacctatatgcgt
accgacagcctccgcatctccgacgaggctgtggcagctgccagagagtacatcgccggg
gcctacggcgagagctatatctgcccctacaagcgcacctggaagaccaagagcgccacg
gcagcgcaggacgcccatgaggccatccgtccctctgtgccgggcctgacccccgacgag
gtagacaagagcatcagcggcgataccgccaagctctaccggatgatctggagccgcttc
atggccagccagatggcggactgccagcaggacaccgtgtccgtcaccgtctatgccggc
ggctaccgcttcaaggccagcggctacacggtcaccttcgacggtttcaccgccctgtac
gaagaggccaccgacgagaaggaaaagaaggagaccagccttcctcccctcgaggagggt
caggtgctcaagctgcgggagctgaagagcgagcagaagttcacccagccccccgcccgc
tacaccgaagccaccctcatcaaggcgctggaagagaacggcatcggccgcccctccacc
tacgcccccatcatcaccaccatcatcgaccgcggctatgtggagcgggagcagaagaag
ctcaagcccaccctgctgggccgggccgtggacggcctgatgctggagcagttcccccac
atcgtggacgtggacttctcggcagagatggagaagaacctcgataaggttgagagcggc
aagacggactggcacaagaccgtggacgacttctacaagggctttgccgccagcctcgag
caggccgagaagaatatggaaggcaagaaggtcaaggtgccggacgagccgtccagcgag
gtctgcgacctctgcggccgtcccatggtcatcaaggtgggcaagtacggcaagttcctg
gcctgcagcggcttccccgagtgccgcggcaccaagcgcctcgtgaaggacaccggcggc
atctgccccaagtgcggcaagggccgtatgctggagcgcaagagcgccaagggccgcatc
tactacggctgtgagcgctaccccgactgcgacttcatgacctgggatatgccggtggcc
gtcaagtgcgagaagtgcggctccactctgttccgcaagggctccaagctctactgcgca
aaagagggctgcgactttgagatgccggtgccgaagaagagcgattaa
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