Faecalibacterium prausnitzii L2-6: FP2_18720
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Entry
FP2_18720 CDS
T02591
Name
(GenBank) RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
fpr
Faecalibacterium prausnitzii L2-6
Pathway
fpr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FP2_18720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpr03021
]
FP2_18720
Transcription machinery [BR:
fpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FP2_18720
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
CBK99295
UniProt:
D4JZ46
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All DBs
Position
1857831..1858910
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AA seq
359 aa
AA seq
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MQKMSQTEEMAKMLAGRARRHILTPEQVSRAMEEQDFDPAGLDELYAALETRGVQVAEEE
TELPLLDEEQIGKLEHELSAEGVALDDPVKTYLKEIGRVPLLSAEEEAALARAAQAGDED
ARRRLSEANLRLVVSVAKRYAGRGLPFLDLIQEGNLGLMKAAEKFEPDRGFKFSTYATWW
IRQSITRAIADQGRTIRIPVHLVESINRVKKTAGELLRRTGREPTAEEIAAQLDMEPARV
RELIQLAQDPISLETPVGEEEDAHLEDFIQDDEAGVPADEAGRQLLRRELMNVLKSLTPR
EERVIALRFGLEDGRARTLEELGREFNVTRERVRQIEAKALRKLRHPSRAKRLRDYLDE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatgtcacagacggaagaaatggcgaagatgctggcgggacgcgcccgccgc
catatcctgacacccgagcaggtgagccgtgccatggaagagcaggacttcgacccggcg
gggctggatgagctgtatgccgcactggagacgcggggcgtgcaggtggccgaggaggag
acagagctgccgcttctggacgaagagcagatcggaaagctcgagcatgagctgtccgcc
gaaggcgtggcgctggacgacccggtgaagacctatctgaaagagatcggccgggtgccg
ctgctctcggcggaagaggaagccgcccttgcccgtgctgcacaggcaggggacgaggac
gcccgccgccgtctcagcgaagcgaacctccgcctcgtcgtctcggtggcaaagcggtat
gccgggcggggcctgcccttcctcgatctgatccaggagggcaacctcggcctgatgaag
gcagcggagaagttcgagccggaccggggtttcaagttctcgacctacgccacctggtgg
atccgccagtccatcacccgggccatcgccgaccagggccgcaccatccgcatcccggtg
catctggtggagagcatcaaccgggtgaagaagacggcaggagagctgctgcgccgcaca
ggccgggagcccaccgccgaggagatcgccgcccagctggacatggagcccgcccgagtg
cgggagctgatacagctggctcaggaccccatcagcctcgagacgccggtgggggaggaa
gaggacgcccacctcgaggacttcatccaggacgatgaggcaggcgtccccgccgacgag
gccgggcggcagctgctccgccgggagctgatgaatgtgctcaagagcctgacgccccgg
gaagagcgggtcatcgccctccgcttcggtctggaggatggacgcgcccggacgctggaa
gagctgggccgggagttcaacgtcacccgggagcgggtgcgccagatagaggccaaagcc
ctgcgcaagctccgccaccccagccgggccaagcgcctgcgggattatctggatgaataa
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