Faecalibacterium prausnitzii L2-6: FP2_22550
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Entry
FP2_22550 CDS
T02591
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fpr
Faecalibacterium prausnitzii L2-6
Pathway
fpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FP2_22550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpr03019
]
FP2_22550
03400 DNA repair and recombination proteins [BR:
fpr03400
]
FP2_22550
Enzymes [BR:
fpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FP2_22550
Messenger RNA biogenesis [BR:
fpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FP2_22550
DNA repair and recombination proteins [BR:
fpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FP2_22550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
CBK99602
UniProt:
D4K003
LinkDB
All DBs
Position
complement(2266384..2267961)
Genome browser
AA seq
525 aa
AA seq
DB search
MADPHSILKKVFGYDSFRPGQEDIVRRLLDGQDVLAVMPTGAGKSICYQVPALLLPGITI
VVSPLVSLMKDQVGALVQAGVAAAFLNNSLTDNQKALMLRRAREGWYKIIYVAPERLEMP
GFQRFAQEKLISMVTVDEAHCISQWGQDFRPSYLRIKAFVDSLPNRPVVGAFTATATARV
RDDIRSHLELRQPYEVTTGFDRPNLYFETRRALPSQKPKELLDLVLREGDNAGIVYCSTT
KQVDETARLLQSRGIRAAAYHAKLDAEVRRKNQDDFLYDRIQIMVATNAFGMGIDKPNVR
FVIHYNMPKDLESYYQEAGRAGRDGLPSRCILLYSGTDVRTIRFFIDKEVEADNGLPADV
KAEAARKAEERLRYMTFYSTTQKCLRRFMLNYFGEAAPEKCGNCSCCLFAEQNAQEVEQR
AAAAKQRAAANSRRLSARRAAAGGDLSEADEKLLAALYALRKRLAAKQNVPAYMVFSDAT
LREMVQSKPLSMDEFLNITGVGEKKAARYGMAFLRAIEDMVGSRE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccgcattctatcttgaaaaaagtttttggctacgacagtttccgccccgga
caggaggacatcgtccggcggctgctggacgggcaggatgtgctggcggtgatgcccacc
ggtgcgggcaaatccatctgctatcaggtgccggccctgcttctgccgggcatcaccatc
gtggtgtcgccgctggtcagcctgatgaaggaccaggtgggggcgctggtgcaggcgggg
gtggcggcggctttcctgaacaacagcctcaccgacaaccagaaggccctcatgctccgc
cgcgcccgggagggctggtataagatcatctatgtggccccggagcggctggagatgccg
ggcttccagcgcttcgcgcaggaaaagctcatcagcatggtgacggtggacgaggcccac
tgcatcagccagtgggggcaggacttccgccccagctatctgcgcatcaaggcgttcgtg
gacagcctgccgaatcgcccggtggtgggcgcgttcacggccacggcgacggcccgtgtg
cgggacgacatccgcagccacctcgagctccgtcagccctatgaggtgacgaccggcttc
gaccggcccaacctctacttcgagacgcgccgcgccctgcccagccagaagccgaaggag
ctgctggaccttgtgctccgggagggcgacaacgcgggcatcgtctattgcagcaccacg
aagcaggtggacgagacggcccgcctgctccagagccggggcatccgggcggcggcctac
cacgccaagctggatgccgaggtgcgccggaagaatcaggacgacttcctctacgaccgc
atccaaatcatggtggccaccaacgccttcggcatgggcatcgacaagcccaacgtccgg
ttcgtcatccattacaatatgcccaaggatctggagagctactatcaggaggcgggccgc
gcgggccgcgacggtctgccgtcccgctgcatcctgctctactccggcacggatgtgcgc
accatccgcttcttcatcgacaaggaggtggaggcggacaacggcctgcccgccgacgtc
aaggccgaggccgcccgaaaggcggaagagcggctcaggtatatgactttctactccacc
acccagaagtgcctgcggcggttcatgctgaactatttcggcgaggccgcacctgaaaag
tgcggcaactgttcctgctgcctctttgccgagcagaacgcgcaggaggtggagcagcgc
gctgccgccgcaaagcagagggccgcggccaactcccggcggctgtcggcccgccgtgcg
gctgccggcggcgacctcagcgaggccgacgagaagctgctggccgcgctctacgccctc
cgcaagcgtcttgcggcgaagcagaatgttccggcctacatggtgttcagcgacgcgacc
ctccgcgagatggtccagagcaagcccctgagcatggatgagtttttgaacatcaccggc
gtcggcgaaaagaaagccgcccgctatggcatggccttcctgcgggccattgaggatatg
gtagggagcagagaataa
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