Faecalibacterium duncaniae A2165: CG447_03940
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Entry
CG447_03940 CDS
T06780
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpra
Faecalibacterium duncaniae A2165
Pathway
fpra03410
Base excision repair
fpra03430
Mismatch repair
fpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CG447_03940 (recJ)
03430 Mismatch repair
CG447_03940 (recJ)
03440 Homologous recombination
CG447_03940 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpra03400
]
CG447_03940 (recJ)
DNA repair and recombination proteins [BR:
fpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CG447_03940 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CG447_03940 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CG447_03940 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ATO99122
LinkDB
All DBs
Position
complement(761973..764114)
Genome browser
AA seq
713 aa
AA seq
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MTTYRAWNLKPLDRSALKELTAAIAQQSTEELESRAMETMDGEPWSEEKYQMTLAAQQKE
AGLLAGILAARGITDPAEALTLLSGEEELTDPMLLTDMDKACARILDAIDREETIVVFGD
YDVDGVTATALLYQHLKGMGANVKCMLPSREGDGYGLSKNAIQSIHDKGCQLIVTVDNGI
SALEEAEFAASLGVDLIVTDHHLPHDTLPKAVAVVDPRRADDTSPFKGLCGAGVAFKLCA
ALDGCPPEEMLDYCGDLAAVGTVADVMPLTGENRTLVKAGLHLLQHSDRPGLLALLDEVG
LGGKPVTAENVSYAIAPRINAAGRMDSAVTALQLVLCEDEERAAELAHKLNEINAARQET
EGEIAKAAQAQLEAEPAILEDRVILIWGRDWHPGVIGIVASRLVEKTGRPVIVVSIDEHG
EGKGSGRSVQGFNLHACIASCEDLLLRFGGHAMAAGLSVREENLPELRRRLNEWAARECP
VLVTPPLECDLSIHLDRITVESVRRLDQLAPYGAENPAPVFLLEKAVVEGVYPVSEGRHC
RLRLRQGNACIYAVWFGMHPEQLPYATGDVVDAALSLSVYEAARGAQLSGRILELHPAGF
GNAAAQQTALVQALRRGSPLTAQQRALIAPERSDIITVYRELQARRWHAEDMQPLFAKLG
EEHTGKTLVALTALEQVGLIAAVERGGAKFWELVPTAGKKNLADAPILKCLEE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctaccgggcctggaacctgaagccgctggaccgctctgccctgaaggagctg
accgcggccattgcccagcagagcactgaggagctggaaagccgcgccatggaaacgatg
gatggggagccgtggagcgaggaaaaatatcagatgacgctggccgcccagcagaaagag
gcgggcctgctggcaggcattctggccgcgcgcggcatcaccgaccctgccgaggccctg
accctgctgtcgggcgaggaagaactgaccgaccccatgctcctgaccgacatggacaag
gcctgtgcccgtatcctcgatgccattgaccgggaggagaccattgttgtctttggcgac
tacgatgtggacggcgtgaccgccaccgccctgctctaccagcacctcaaggggatggga
gccaacgtcaagtgtatgctgcccagccgtgaaggcgatggctacggcctttccaaaaat
gccatccagtccatccacgataagggctgccagctcatcgtgacggtggacaacggcatc
tccgcactggaggaggctgagtttgcggcttcactgggggtggacctgatcgtcaccgat
caccatctgccccatgataccctgcccaaagccgttgccgtggtggacccccgccgcgcc
gatgataccagccccttcaagggcctgtgcggcgcaggtgtggccttcaagctctgtgcc
gcgctggacggctgcccgcccgaggagatgctggactactgcggcgaccttgccgccgtg
ggcaccgtggcagacgtgatgcccctgaccggcgagaaccgcaccctggtcaaagcgggc
ctgcacctgctgcagcactctgaccggcccggccttctggccctgctggatgaggtgggg
ctgggcggcaagcccgtgaccgccgagaatgtcagctacgccattgccccccgcatcaac
gcggcgggccggatggacagcgctgtgaccgccctgcagctggtgctgtgtgaggatgag
gaacgcgctgccgagctggcacataaactgaacgagatcaacgccgcccggcaggagacc
gagggcgagatcgccaaggccgcgcaggcccagctggaggccgagcccgccattctggag
gaccgggtcatcctgatctggggccgggactggcaccccggtgtcattggcatcgtggca
tcccggctggtggaaaagaccggccgccccgtcatcgtggtgtccattgatgagcacggc
gagggcaagggcagcggacgcagtgtgcagggcttcaacctgcacgcctgcattgcctcc
tgcgaagatcttctcctccgcttcggcggccacgccatggcggcgggcctttcggtacgg
gaggagaatctgccggagctgcgccgccgcctgaacgagtgggctgcccgggagtgcccg
gtgctggtgactccgccgctggaatgcgacctgtccatccatctcgaccgcattaccgtg
gaatctgtccggcggctggaccagctggctccctacggtgccgagaaccccgccccggtg
ttcctgctggaaaaggctgtggtggagggagtctaccctgtctcggaggggcggcactgc
cgcctgcgcctgcggcagggcaatgcctgcatctatgcggtctggttcgggatgcacccg
gagcagctgccctatgccaccggcgatgtggtggacgcggccctgagcctctcggtttac
gaggccgcccggggcgcgcagctttcgggacgcattctggagctgcacccggcgggcttt
ggcaacgccgccgcccagcagaccgcactggtgcaggccttgcgccgcggcagcccgctg
actgcccagcagcgcgccctgatcgcaccggagcgcagtgatatcattaccgtttaccgg
gaactgcaggcccggcgctggcacgccgaggatatgcagcccctgtttgcaaagctgggg
gaggagcacaccggcaaaacgctggtggccctgacggccctggaacaggtgggcctgatc
gccgccgtggagcgcggcggggcaaagttctgggagctggttcccacggcaggcaagaaa
aacctggccgatgcccccatcctgaaatgtctggaggagtaa
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