Faecalibacterium duncaniae A2165: CG447_13985
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Entry
CG447_13985 CDS
T06780
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fpra
Faecalibacterium duncaniae A2165
Pathway
fpra03030
DNA replication
fpra03430
Mismatch repair
fpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CG447_13985 (holA)
03430 Mismatch repair
CG447_13985 (holA)
03440 Homologous recombination
CG447_13985 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpra03032
]
CG447_13985 (holA)
03400 DNA repair and recombination proteins [BR:
fpra03400
]
CG447_13985 (holA)
Enzymes [BR:
fpra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CG447_13985 (holA)
DNA replication proteins [BR:
fpra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CG447_13985 (holA)
DNA repair and recombination proteins [BR:
fpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CG447_13985 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
GvpK
Clp_N
Motif
Other DBs
NCBI-ProteinID:
ATP00922
LinkDB
All DBs
Position
complement(2846825..2847853)
Genome browser
AA seq
342 aa
AA seq
DB search
MATEAKLRQLADRGCPVYYFYSSERYLVRQAVSAAVRILSADTDEETTVLDGAAPEIEQL
IMAAGTISFFGTRRVVVLPELDPAAYGDKDLEELCSTLSSLENAVVVLGSVFELERSKLK
TGKRAQKLIAECKKLGFVEELSKPKPYELKMMLIERAKAQDTTLPEGAAAALLERCGEDP
FLLENEVDKLCALSGYQTVTAAMVAEMGTVSLEADVFEMIRMITAKNATGACKKLQTLLR
LQQEPIAITGAMIGSYVDLYRVKLGASKRKSYAAVFKDFGYKGSDYRLKRSAETASHYTL
GQLETCLQVLLDLDKSLKSQPVDVQTLLEAALCRLALAGSGR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggaagccaaactgcgccagctggcagaccgcggctgtccggtctactatttc
tattccagcgaacggtatcttgtccggcaggcggtgtctgccgccgtccggatactgagc
gctgacacagatgaggagaccaccgtgctggacggtgccgcgcccgagatcgagcagctc
atcatggcggcgggcaccatctccttctttggcacccgccgcgtggtggtgctgcccgag
cttgaccccgccgcctacggcgacaaggatctggaggaactgtgcagcaccctttccagc
ctggaaaatgccgtggtggtgctgggcagtgtgttcgagctggagcgcagcaagctcaag
accggcaagcgggcacagaagctgattgctgaatgcaaaaagctgggctttgtcgaggag
ctctccaaacccaagccctacgagctgaagatgatgctcattgagcgggccaaggcgcag
gataccaccctgcccgagggcgctgccgcagccctgctggagcgctgcggcgaggatccc
ttcctgctggaaaacgaggtagacaagctctgtgccctttccggctaccagaccgttacc
gccgccatggtggccgagatgggcaccgtgagcctggaagcggatgtgtttgagatgatc
cggatgatcactgccaagaacgccaccggtgcctgcaaaaagctgcagaccctgctgcgc
ttacagcaggagcccattgccatcaccggcgcaatgattggcagttatgtagacctgtac
cgggtcaagctgggggcttccaaacggaagagctacgccgccgtgttcaaggattttggc
tacaagggcagcgactaccggctcaagcgctcagccgaaacggcatcacattacacgctg
ggccagctggagacctgcctgcaggtgctgctggacctcgataaaagtttgaagagccag
cccgtggatgtgcagaccctgctggaagcagcactctgccgtctggcgctggcggggagc
ggacgatga
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