Flavobacterium psychrophilum JIP02/86: FP0104
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Entry
FP0104 CDS
T00548
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fps
Flavobacterium psychrophilum JIP02/86
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fps03400
]
FP0104 (radA)
DNA repair and recombination proteins [BR:
fps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FP0104 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
DUF7125
Lon_C
AAA
AAA_22
AAA_5
AAA_24
CobU
AAA_14
AAA_16
NTPase_1
AAA_18
TniB
GvpD_P-loop
ABC_tran
nSTAND_NTPase5
NACHT
Isochorismatase
nSTAND3
MCM
RsgA_GTPase
SLFN-g3_helicase
HypA
DZR
Motif
Other DBs
NCBI-ProteinID:
CAL42222
UniProt:
A6GVU9
LinkDB
All DBs
Position
complement(142122..143483)
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AA seq
453 aa
AA seq
DB search
MAKVKTSFFCQSCGSQYSKWQGQCNACKEWNTIVEEIIQKEEKVAWKAETSEVKKASKPL
LVKEIDSTQEIRMNTCDGELNRVLGGGIVPGSLILLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESQKQIKMRAERITTNGDNCYILTETKTQNIFRQIQEIEPEIVIIDSIQTLHTDY
IESSPGSISQIRETTAELIKFAKETNVPVILIGHITKDGSIAGPKILEHMVDTVLQFEGD
RNHVYRILRSLKNRFGSTAELGIYEMQGSGLREVSNPSEILISHKNEELSGTAIASTLEG
MRPLMIEIQALVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGAKDVFLNITGGI
SVDDPAIDLAVVAAILSSNEDIPINKDFCFAGEVGLSGEIRPVNRVDQRIQEAEKLGFST
IYVSKYNKISLKNTGIKIQLVAKIEDIVSELFG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtaaaaacatcttttttttgccaaagttgcggctcacaatactctaaatgg
caaggacaatgcaacgcttgcaaagaatggaacaccattgttgaagaaattattcaaaaa
gaagaaaaagtagcttggaaagccgaaacatcggaagtaaaaaaagcttctaaaccactt
ttagtaaaagaaatagacagcacacaagaaatccgaatgaacacttgcgatggcgaacta
aatcgagtacttggtggtggcatagttcctggatcattaatactcttaggaggagaaccc
ggtattggaaaaagtacgcttttacttcaaatttcgttaaaattaccctacaaaacctta
tatgtttcaggcgaagaaagtcagaagcaaataaaaatgcgtgccgaaagaattaccaca
aacggcgacaattgttacatattaacagaaaccaaaactcaaaatatatttcgccaaatt
caggaaatagaacctgaaattgtgattatagattcgattcaaacattgcatacagattat
atcgagtcttcgcctggaagtatttctcaaattcgagaaaccactgccgaactcataaaa
tttgccaaagaaaccaatgttcccgttatcctaattggtcatattaccaaagacggaagc
attgctggacctaaaattttggaacacatggtggatactgttttacaatttgaaggagat
agaaaccacgtgtatcggattcttcggtcgttaaaaaatcgttttggttctactgccgaa
ctcggtatttacgaaatgcaaggttccggattgcgagaagtttctaatccatcagaaata
ttgatatcgcacaaaaacgaagaattatccggaacagcaattgcttcaacgctagaggga
atgcggccactgatgatagaaattcaagcattagtatctaccgctgtttacggaacaccg
caacgaagcaccacaggctacaatgccaaacgactcaatatgattctcgctgttctcgaa
aaaagagccggatttcgtttgggagctaaagatgttttcctaaatattactggcggaatt
tcggtagatgatcctgcgatagatttggccgttgtggctgccatattatcatctaacgaa
gatattcctattaataaagatttttgttttgcaggcgaagtaggactttcgggcgaaatt
cgtccggtaaatcgcgtcgaccaacgcattcaagaagcagaaaaattaggtttttcgacc
atttacgtatctaaatacaataaaatttcattaaaaaacactggaatcaaaatacaatta
gttgcaaaaattgaagatattgtaagtgaattgtttgggtaa
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