Flavobacterium psychrophilum JIP02/86: FP0290
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Entry
FP0290 CDS
T00548
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps03030
DNA replication
fps03410
Base excision repair
fps03420
Nucleotide excision repair
fps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FP0290 (polA)
03410 Base excision repair
FP0290 (polA)
03420 Nucleotide excision repair
FP0290 (polA)
03440 Homologous recombination
FP0290 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fps03032
]
FP0290 (polA)
03400 DNA repair and recombination proteins [BR:
fps03400
]
FP0290 (polA)
Enzymes [BR:
fps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FP0290 (polA)
DNA replication proteins [BR:
fps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FP0290 (polA)
DNA repair and recombination proteins [BR:
fps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FP0290 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FP0290 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAL42404
UniProt:
A6GWD1
LinkDB
All DBs
Position
complement(362080..364926)
Genome browser
AA seq
948 aa
AA seq
DB search
MSQKRLYLLDAYALIFRGYFAFIKNPRINSKGMDTSAIMGFMNALMDVIKREKPDHLAVA
FDKGGSTYRYEMYQEYKAHRDETPEAIKIAVPYIQDLLKAMHIPIIEVAGFEADDLIGTL
AKQAEKEDFKVYMVTPDKDFAQLVSENIFMYKPARMGNDIEIWGVPEVLAKFEIERPEQV
IDFLGMMGDAADNIPGLPGVGEKTAKKFLKEYGSIENLLANTHQLKGAIKDKIEANKEKG
ILSKKLATILLDCPVTFNASTYELSKPDVEKTDELFQELEFRQMKTQFDKYFGTGKDYDE
IDTNENDNSQIQKKTVAKKTNEDQFDLFGFSDQESGEIKTDSHYAKLENTEHFYQSIEGD
FAVKLLLQNLLNQTSVCFDTETTGIDALNAQLVGMSFSFEKGKAFYVPFPENQEDAQVLA
DKFKPFFESESIEKIGQNIKYDLKILSHYGVQIKGKLFDTMIAHYLINPDMRHNMDVLSE
TYLKYSPKSIEDLIGKKGKNQKSMRDVSLEEIKEYAAEDADITYQLKQNFSPILDKAETK
KLFEEIEIPLIPVLAAMELEGINLDVPFLKSMSAEMALESNALEQKIYETAGEKFNLASP
KQLGDVLFDKMKIGGAKQKKTKTGQYATGEEILSYLANDNPIVKDILEWRQMVKLQSTYI
DALPNQVDKKTGRVHTDYMQTVAATGRLSSNNPNLQNIPVRTERGRLIRKAFIPRNENYT
LISADYSQIELRIIAALSGEENMIAAFQNNQDIHKSTAAKVFNVALEDVTKEQRSNAKTV
NFGIIYGVSAFGLSNQTSLSRKESAELIDAYYATYPKLKSYMSNQVDFARENGYVQTVLG
RRRYLKDINSANMMVKSGAERNAVNAPIQGSAADIIKIAMINIHKKLTQENWQSKMLLQV
HDELVFDVHNSELEKIQPMIKYEMENAFKIDVPLDVEIGIGKNWLEAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaacgcctttaccttctagatgcttacgctttaatatttcgtggttatttt
gcctttataaaaaacccaagaattaactcaaaaggcatggatacctctgccattatgggc
tttatgaatgccttaatggatgttataaaacgggaaaaaccagaccatttagccgtagct
ttcgacaaaggcggcagcacctaccgatacgaaatgtaccaagaatacaaagcgcatcga
gacgaaacgcccgaagccataaaaattgccgttccgtacatacaagatttactaaaagcc
atgcacattcctattattgaagtggcaggttttgaagcagatgatttaataggtacctta
gcaaaacaagccgaaaaagaagattttaaagtatatatggttacgccagataaggatttt
gcacaattggtttcagaaaatatttttatgtacaaacccgcgcgtatgggtaacgacata
gaaatttggggagttccagaagttttagcaaaattcgaaatagaaagacctgaacaagtt
attgattttctaggaatgatgggcgatgccgccgataacattccaggattaccaggtgtt
ggcgaaaaaacagcaaaaaaattcctaaaagaatacggatcgatagaaaaccttttagcc
aatacacaccaattaaaaggagccattaaagacaaaattgaagccaataaagaaaaagga
atcttatctaagaaactcgctacaatattactagattgtcctgtaaccttcaacgcttct
acttacgaattatctaaacctgatgtcgaaaaaacagacgaactgtttcaagaattagaa
tttaggcaaatgaaaacacagtttgacaaatattttggaacaggaaaagattatgacgaa
attgacactaatgaaaatgacaatagtcaaattcagaaaaaaactgtggctaaaaaaacc
aacgaagaccaattcgatttatttggtttttcggaccaagaaagtggcgaaataaaaaca
gactctcattatgcaaaattagaaaacacagaacatttttaccaaagtattgaaggcgat
tttgctgtaaaattactacttcaaaacctactcaatcaaacttcagtatgtttcgatact
gagactaccggaattgatgccttaaatgcccaattggttggaatgtcattttctttcgaa
aaaggaaaagctttttatgttccttttccagaaaaccaagaagacgcacaagttttggca
gacaaatttaaaccttttttcgaaagtgaaagcatcgagaaaattggtcaaaacatcaaa
tatgatttaaaaatcctttcgcattacggagttcaaatcaaaggaaaattattcgatacc
atgattgcacattatctgattaatccagatatgcgtcataatatggatgttttaagtgaa
acctatttaaaatattcgccaaaatcgattgaagatttaattggcaaaaaaggcaaaaat
caaaaatcgatgcgtgacgtttctttagaagaaattaaagaatacgctgccgaagatgct
gatattacctatcagttgaaacaaaattttagtccaattcttgacaaagcagaaaccaaa
aaactttttgaagaaatagaaattccgctaattcctgttttggcagccatggaattagaa
ggaattaatctcgacgttccgtttttaaaatcgatgtcggcagaaatggccctcgaaagc
aatgcgctagaacaaaaaatatacgaaaccgcaggggagaaatttaatttggcttcaccc
aaacaactcggcgatgttttatttgacaagatgaaaattggcggagcaaaacaaaagaaa
accaaaacagggcaatatgccactggcgaagaaattttaagctatttagccaatgacaat
ccaattgtaaaagacattttagaatggcgccaaatggtaaaattacaaagcacttatatt
gatgccttacccaaccaagtagataaaaaaacaggacgtgtacacacagattatatgcaa
actgttgctgcaactggtcgtttaagctctaacaatcctaacttacaaaatattcctgtg
cgaaccgaaagaggacgattaattcgaaaagcctttattcctcgcaatgaaaattacacg
ttaatttctgccgattattcgcaaatagagctacgaattattgccgctttatctggtgaa
gaaaacatgattgcagcttttcaaaacaaccaagacattcacaaaagcaccgctgcaaaa
gtatttaatgttgcattagaagacgttacaaaagaacaacgaagcaatgctaaaacggta
aatttcggaattatttatggcgtttcggcttttgggctttctaatcaaacctcactttca
agaaaagaaagcgcagagttaattgatgcctattatgcaacgtatccgaaactaaaatcg
tacatgtccaaccaagtagatttcgctagagaaaacggctatgtacaaactgttttggga
agaagacgctatttaaaagatattaattcggccaatatgatggtaaaaagtggtgccgaa
cgaaatgctgtaaacgcacctattcaaggctctgcggccgatattattaaaattgcgatg
attaatattcacaaaaaactaacccaagaaaactggcaatcgaaaatgttattgcaagta
catgacgaattggtttttgatgttcataattctgaattagaaaaaattcaaccgatgata
aaatacgaaatggaaaacgcctttaaaatagatgttccgttagatgttgaaattggaatt
ggcaaaaactggttagaagcgcattaa
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