KEGG   Flavobacterium psychrophilum JIP02/86: FP0965
Entry
FP0965            CDS       T00548                                 
Name
(GenBank) Probable DNA polymerase III subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
fps  Flavobacterium psychrophilum JIP02/86
Pathway
fps03030  DNA replication
fps03430  Mismatch repair
fps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FP0965
   03430 Mismatch repair
    FP0965
   03440 Homologous recombination
    FP0965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fps03032]
    FP0965
   03400 DNA repair and recombination proteins [BR:fps03400]
    FP0965
Enzymes [BR:fps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FP0965
DNA replication proteins [BR:fps03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FP0965
DNA repair and recombination proteins [BR:fps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FP0965
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 AAA_14 RuvB_N AAA_5 AAA_30 Rad17 AAA_16 nSTAND3 ResIII DNA_pol3_delta_C TIP49 DNA_pol3_gamma3 RCF1-5-like_lid AAA_24 NTPase_1 AAA_19 RNA_helicase AAA_18 AAA_7 NACHT AAA_assoc_2 Mg_chelatase AAA_28 DUF815 Sigma54_activ_2 NPHP3_N GNAT_acetyltr_2 AAA_2 dNK TsaE T2SSE
Other DBs
NCBI-ProteinID: CAL43059
UniProt: A6GY86
LinkDB
Position
complement(1239309..1240394)
AA seq 361 aa
MEQFVVSARKYRPQTFKDVVGQQAITNTLLNAIETNHLASALLFTGPRGVGKTTCARILA
RKINQPGYDDPNEDFAFNVFELDAASNNSVDDIRNLIDQVRIPPQTGQYKVYIIDEVHML
SSAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
TNQGVIFEDDALHIIAQKADGAMRDALSIFDRVVSFCGKNLTRQAVTENLNVLDYETYIN
VTNLILENKIPELLLAYNDILAKGFDGHHFVAGLASHFRDLLVSKTPATITLLEVGEQAQ
KMYYVQSQKASQDFLLQGIDLANDCDLKFKLSQNQRLLVELCLMQLASITFDGEKKKLNN
I
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacaatttgtagtatcggctcgtaaatatcgtccgcaaacgtttaaagacgtggtg
gggcaacaagccattaccaatacgttactaaatgcgatagaaacaaatcatttggcatca
gccctattatttactggtcctcgtggcgtaggaaaaacaacttgtgccagaattttagcc
agaaaaataaaccaaccaggttacgacgacccgaacgaagattttgctttcaatgttttc
gaactcgatgcggcttcaaacaattcggtcgatgatattcgtaatctaatcgatcaagtt
cgtatccccccacaaacgggacaatataaagtttatattatcgatgaggttcacatgtta
tcatctgcagcatttaatgcttttttgaaaacattagaagaaccaccaaaacatgccatt
tttattttggcaacgaccgaaaaacataaaattattccaacgatattatctcgttgtcag
atattcgatttcaaaagaattactgtaaaagatgccaaggaacatctcgccgaagtagct
accaatcaaggtgtcattttcgaagacgatgctttgcatattattgcccaaaaagcagat
ggtgccatgcgcgatgctttgtctatttttgatagagttgtgtctttttgtggaaaaaac
ctaacacgacaagcagttaccgaaaacttgaatgtgctagattatgaaacctatattaat
gtaacgaatttaattttagaaaataaaattccagaattactattggcttacaacgatatt
ttggcaaaaggtttcgatgggcatcattttgtagctggattggcttcgcattttagagat
ttgttggttagcaaaacccctgcaactatcactttactagaagttggcgagcaagctcaa
aaaatgtattatgtacaatctcaaaaagcttcacaagattttctgttacaaggaatcgat
ttggctaatgattgtgatttaaaatttaagctttctcaaaaccagcgattactagtagaa
ctttgtttgatgcaactagcctctatcacttttgatggagaaaaaaaaaagctaaacaat
atataa

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