Flavobacterium psychrophilum JIP02/86: FP1014
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Entry
FP1014 CDS
T00548
Symbol
phrB1
Name
(GenBank) Deoxyribodipyrimidine photolyase PhrB1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fps03400
]
FP1014 (phrB1)
Enzymes [BR:
fps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FP1014 (phrB1)
DNA repair and recombination proteins [BR:
fps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FP1014 (phrB1)
Prokaryotic type
FP1014 (phrB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
BMT5-like
Motif
Other DBs
NCBI-ProteinID:
CAL43108
UniProt:
A6GYD5
LinkDB
All DBs
Position
complement(1184907..1186193)
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AA seq
428 aa
AA seq
DB search
MNIFWFRRDLRLDDNVGLFHALNSDQTILPIFIFDYNILSQLSKDDARVTFIHELLSKMQ
KKLQEKGKSLAVFYGKPSEIFEKLISENKVKTIYTNHDYEPYARKRDKELNQLFANHNIQ
FLTSKDQVIFEKSEVTKDDGKPYIVYTPYTNKWKEKFKQTTLKNYNSENYLDKIVTHPYP
FLSLESIGFETSKITVASYDISENLIDNYEATRNFPSLNKTSFLGIYLRFGAVSVRKMMQ
EAIKSKNETFFKELIWREFFMQILWHFPHTINKSFKEKYDAIIWENKEDLFQKWCQGKTG
YPFVDAGMRELNATGHMHNRVRMIVASFLCKHLLIDWRWGETYFATKLLDYEQSSNVGNW
QWAAGSGVDAAPYFRIFNPTEQIKKFDKDLKYIKKWIPELQTSHYPEPIVEHKFARERCL
KVYKEAVG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattctggttccgccgtgatttgcgattagatgataatgtaggattatttcat
gctctaaatagtgaccaaactattttgcccatcttcattttcgattataacatactctcg
caactatctaaagatgatgctcgtgttacttttattcacgaactattatctaaaatgcaa
aaaaaattacaagaaaaaggaaaatcgttagctgttttttacggaaaaccatcagaaatt
ttcgaaaaactaatttccgaaaataaagtaaaaacaatttacacaaaccacgattacgaa
ccctacgctcgcaaacgagataaagaactaaaccagctatttgcaaaccataacatacaa
ttcctaaccagcaaagaccaagttattttcgaaaaaagtgaagtcacaaaagatgacgga
aaaccctatatagtttacacaccatatactaacaaatggaaagaaaaatttaagcaaaca
accctaaaaaattataattccgaaaattatttagacaaaatcgttacacacccctaccct
tttctaagcctagaatcgataggatttgaaacatcaaaaataaccgtcgcatcctatgat
atatcagaaaatttaatagataattacgaagctacaagaaatttcccctcactaaataaa
acttcatttctaggtatttatcttcgtttcggagccgtttctgtcagaaaaatgatgcag
gaagccatcaaaagtaaaaacgaaactttttttaaagaacttatttggagagaatttttt
atgcaaatattatggcatttcccacacaccataaataaaagttttaaagaaaaatatgat
gccattatttgggaaaataaagaagatttattccagaaatggtgccaaggaaaaacgggt
tatccctttgtagatgcaggaatgagagagcttaatgcaactggacacatgcacaataga
gtacgcatgatagtggccagttttttatgcaaacatttactaatagattggcgctgggga
gaaacttattttgccacaaaacttttagattacgaacaatcaagtaatgtaggcaactgg
caatgggcggctggttctggtgtagatgcagcaccctattttagaatttttaatcccaca
gaacaaataaaaaaattcgacaaagacttaaaatacatcaaaaaatggattcctgaattg
caaacctctcattatccagaaccaatcgtagaacacaaatttgcaagagaacgctgctta
aaagtttataaagaagccgtaggatag
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