Flavobacterium psychrophilum JIP02/86: FP1139
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Entry
FP1139 CDS
T00548
Symbol
msbA
Name
(GenBank) Probable lipid A transport system, ATPase and permease components
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FP1139 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fps02000
]
FP1139 (msbA)
Enzymes [BR:
fps01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FP1139 (msbA)
Transporters [BR:
fps02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FP1139 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
AAA_22
ABC_ATPase
AAA_29
nSTAND3
PPV_E1_C
MMR_HSR1
AAA_24
APS_kinase
AAA_18
AAA_25
AAA_23
AAA_16
FeoB_N
Ploopntkinase3
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAL43226
UniProt:
A6GYQ3
LinkDB
All DBs
Position
complement(440421..442235)
Genome browser
AA seq
604 aa
AA seq
DB search
MENIKKIIPFVKPYKNHVVWNIFYNILYALFSTLSFIALMPMMQVLFETTKAVNKKPIWT
DIWDITKYGKELLYYNITLLDKKDALILVIILIIFTFFFKNIFNYLASYHMMHLQNNVLK
DLRIQLFEKIISLPIGFYSEQRKGDVMSRMLGDVGQFQNTFFVVLELIVREPLTILFTII
AMFNISVKLTLFVFVFIPISGFIISRLGKNLKSKSNKAQAESGFFISILEETLGGMKVVK
SYNAENMFTKKFTDSIMRMIKLSTSIGNKNNLASPLSEFLGIVTIAILLWYGGKMVLVDH
TLEGAVFIVYMALAYNILTPAKAISKASYSVKAGMAAAERVLVILEHENPITSKENAIEK
NTFEDKIEIKNINFRYEEENVLKNFTITVPKGKTIALVGQSGSGKSTIANLLTRFYDVNE
GNITIDGIDIKDMKLESLRGLMGLVTQDSILFNDTIKNNILLGKENATDEEVIEALKIAN
AYEFVMNLPNGIETNIGDAGNKLSGGQKQRLSIARAVLKNPPIMILDEATSALDTESEKF
VQIALENMMQNRTSIVIAHRLSTIQKADNIIVMKKGEIVEQGTHTELLALNGTYSNLVTM
QSFE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacataaaaaaaataattccttttgtaaagccttacaaaaatcatgttgtttgg
aatatcttctataatattctttacgctttatttagtacactttcatttattgcactaatg
ccaatgatgcaggtgctttttgaaactacaaaagcagtaaacaaaaaaccaatctggact
gatatttgggatattacaaaatacggcaaagaattattgtactataacattacgctttta
gacaaaaaagacgctttaattttagttatcattctaattatttttacttttttctttaaa
aatatttttaattatttggcctcctaccacatgatgcatttgcaaaacaatgtgttgaaa
gatttgagaattcagctttttgaaaaaattatttctttaccaataggcttttattccgaa
caacgaaaaggagatgtcatgtctagaatgttaggagatgtaggtcagtttcagaatact
ttttttgtggttttagaactcatagtaagagaacctctaactatattgtttaccatcatt
gccatgtttaacattagtgtaaaattgacattgtttgtttttgtttttatcccaatttca
ggatttatcatatccagattaggaaaaaacttaaaaagcaaatctaataaagcacaggca
gaatcaggtttttttatatctattcttgaagaaactttgggcggaatgaaagtcgtaaaa
agctataatgccgaaaatatgtttaccaaaaaatttacagattcgataatgagaatgata
aaattatctaccagtattggaaataaaaacaacttagcatcaccattaagcgaattttta
ggaattgtaaccattgccattttattatggtatggaggtaaaatggttttggttgatcac
actttagaaggtgcggtttttatagtatatatggcattagcatacaacatattaactcct
gcaaaagcaatttcaaaagcttcttattcagtaaaagctggtatggctgcagccgaaaga
gttttagttatcttagaacacgaaaatccaatcacatcaaaagaaaatgctattgaaaaa
aatacttttgaagacaaaattgaaatcaaaaacattaattttcgttatgaggaagaaaat
gtattgaagaactttaccattacagttcctaaagggaaaactatcgctttggttggacaa
tcgggttcaggaaaaagtaccattgctaatttattaactcgtttttacgatgtaaatgaa
ggaaatataactattgatggtattgatataaaagacatgaaactcgaatcacttcgtggt
ttgatgggattagttacgcaagattctatcctttttaatgatactataaaaaataatatt
cttttaggcaaagaaaatgcaactgatgaagaagttattgaagcactaaaaatagccaac
gcttatgagtttgtcatgaatttgccaaacggaattgaaaccaatattggcgatgccgga
aacaaactctctggtggacaaaaacaacgtttgtctatcgctcgtgcggtattgaaaaat
cctccaattatgattttggatgaagctacttcagcattggacactgaaagtgaaaaattt
gttcaaattgcattagaaaacatgatgcaaaacagaacttcgattgtaattgcccataga
ttatctactattcaaaaagcagataatattattgtcatgaaaaaaggagaaattgtagaa
caaggaacacatacagagcttttagcgctaaacggaacttattcgaacttggtaaccatg
caaagtttcgaatag
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