Flavobacterium psychrophilum JIP02/86: FP1195
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Entry
FP1195 CDS
T00548
Symbol
dnaQ
Name
(GenBank) Probable DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps03030
DNA replication
fps03430
Mismatch repair
fps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FP1195 (dnaQ)
03430 Mismatch repair
FP1195 (dnaQ)
03440 Homologous recombination
FP1195 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fps03032
]
FP1195 (dnaQ)
03400 DNA repair and recombination proteins [BR:
fps03400
]
FP1195 (dnaQ)
Enzymes [BR:
fps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FP1195 (dnaQ)
DNA replication proteins [BR:
fps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FP1195 (dnaQ)
DNA repair and recombination proteins [BR:
fps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FP1195 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF2779
Motif
Other DBs
NCBI-ProteinID:
CAL43278
UniProt:
A6GYV5
LinkDB
All DBs
Position
complement(2303803..2304285)
Genome browser
AA seq
160 aa
AA seq
DB search
MTFTAIDFETATAFHPCSVGIVTVQNGVIVDEFVTLIKPPNNQYSPFTIAVHGIRPRDTV
NAKSFLEVYPEIKKRLQNKTVVAHNESFDRNVLAKSMALYGLDYETLNISNRWECTLKIY
KAKGFKPTKLSDCCQEMNIKLNHHEALSDARACAKLYLLR
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgacatttactgccatcgatttcgaaactgcaaccgcatttcatccctgttcagtcggg
attgtaactgtacaaaatggtgttattgtcgatgaatttgttacgctaattaaaccgcca
aacaatcaatactctccttttacgattgccgtgcatgggatacgccctcgtgataccgtt
aatgcaaaatcgttcttagaggtatatccagaaataaaaaaacgccttcaaaataaaaca
gtagtagctcataatgaaagtttcgatcgcaacgtactggcaaaatctatggcactttac
gggctagattatgaaacgttaaatattagcaaccgttgggaatgcaccctaaaaatatac
aaagccaaaggatttaaaccaacaaaattaagtgattgttgccaggaaatgaatataaaa
ctaaaccatcacgaagccctgtctgatgctagagcttgtgcgaaattgtatttgttgcga
taa
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