Flavobacterium psychrophilum JIP02/86: FP1438
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Entry
FP1438 CDS
T00548
Name
(GenBank) Probable DNA polymerase III subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps03030
DNA replication
fps03430
Mismatch repair
fps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FP1438
03430 Mismatch repair
FP1438
03440 Homologous recombination
FP1438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fps03032
]
FP1438
03400 DNA repair and recombination proteins [BR:
fps03400
]
FP1438
Enzymes [BR:
fps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FP1438
DNA replication proteins [BR:
fps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FP1438
DNA repair and recombination proteins [BR:
fps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FP1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
TMEM95
Motif
Other DBs
NCBI-ProteinID:
CAL43514
UniProt:
A6GZJ1
LinkDB
All DBs
Position
601585..602355
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AA seq
256 aa
AA seq
DB search
MELKLTRPICFFDLETTGIDIGKDRIVEISVFKIFPNGNKESKTWLVNPTIPIPAQTTAV
HGITDEKVANEPTFNELASQVYNMIKDSDLAGFNSDRFDIPLLAEELLRAGVDFDMKGRV
SVDVQTVFHKMEERTLSAALKFYTGKSLENAHSAEADTMATYEILKAQLDRYPELENDMK
SLSEFTTRKKIADFAGMIAFDKDNEEVFTFGKHKGVKVNKVLETEPGYFSWIQNADFPLY
TKKVLTAIKLRKLNTK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaaattaacccgtccaatttgctttttcgatctcgaaaccacaggaatagac
ataggaaaagacaggattgtcgaaatatcagtatttaaaatttttccaaacggaaacaaa
gaaagcaaaacatggttggtaaatcctaccattccaattcccgcacaaaccacggcagtg
cacggaataacagacgaaaaagtagctaacgaaccaacttttaacgaattggcgtcgcag
gtttataatatgataaaagattcagatttagcaggatttaattctgatagatttgatatt
ccgttattggcagaagaattacttcgtgcaggtgtcgatttcgatatgaaaggaagagtc
tctgtcgatgtgcaaactgtttttcataaaatggaagaacgaacgttaagcgcagcactc
aaattttatacgggtaaatctctagaaaacgcccattctgcagaagcagatacaatggca
acatacgaaattctaaaagcacaacttgatcgttatccggaattagaaaatgacatgaaa
tcactttcagaattcacaaccagaaaaaaaatagccgattttgctggaatgatagctttt
gataaagataatgaagaagtttttacctttggaaaacacaaaggagtaaaagtaaataaa
gttttagaaacggaaccaggttattttagttggattcaaaacgcagattttccgttatat
accaagaaagttctaacagcaattaaacttcgaaaactaaacactaaataa
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