Flavobacterium psychrophilum JIP02/86: FP1476
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Entry
FP1476 CDS
T00548
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps02024
Quorum sensing
fps03060
Protein export
fps03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FP1476 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FP1476 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FP1476 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fps02044
]
FP1476 (ffh)
Enzymes [BR:
fps01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FP1476 (ffh)
Secretion system [BR:
fps02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FP1476 (ffh)
Eukaryotic Sec-SRP protein
FP1476 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
cobW
CbiA
AAA_33
AAA_24
CLP1_P
AAA_31
AAA_17
DUF5693
6PF2K
APS_kinase
ATP_bind_1
TsaE
KAP_NTPase
NACHT
AAA_18
NPHP3_N
DO-GTPase1
AAA_16
ArsA_ATPase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
CAL43549
UniProt:
A6GZM6
LinkDB
All DBs
Position
568226..569575
Genome browser
AA seq
449 aa
AA seq
DB search
MFNSLSEKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTAKVKEKAI
GADVLTTLQPGQLLVKIVKDELTELMGGDVAGINLSGTPTVILMSGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVACDIYRPAAINQLHVVGGQIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDEEMMAEISRVHKAIQPQETLFVVDAMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMDAIDVFYPERMAERILGMGDVV
SLVERAQEQYDEEEARKIQRKIAKNEFGFDDFLSQIQQVKKMGNMKDLVGMIPGAGKALK
DVEIQDDAFKHIEAIIYSMTPTERSKPAIIDVKRKARIAKGAGRKLEEVNQLMKQFDQMS
KMMKIMQGPGGKNMMKMMGGMKGGMPGMK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatagtttaagcgaaaagttagataaagccttccatatattaaaaggtcacgga
aaaatcaccgaagtaaacgttgccgatacactaaaagaagtgcgtcgtgccttactagat
gccgatgttaacttcaaaatagccaaagattttactgccaaagtaaaagaaaaagcaata
ggagcagacgttctaacaaccttacagccaggacaattattagttaaaattgtaaaagac
gaattaaccgagttaatggggggcgatgtagcaggaattaacctttctggaacaccaaca
gtaattttaatgtcaggattgcaaggttctggaaaaactactttttcaggaaagttggct
aattttttaaaaactaaaaagaacaaaaaaccattattggttgcctgcgatatttatcgc
cctgctgcaataaatcaattacatgtagttggaggacaaataggtgtcgaggtttactct
gaaccagaaaataaaaatccagtagaaattgctcaaaatgcaataaagcacgctaaagcc
aatggttttaatgtcgttatagtagatacagcgggtcgtttagctgtcgatgaagaaatg
atggcagaaatttctcgtgttcataaagcaattcaaccacaagaaaccttgtttgttgta
gatgcaatgacaggacaagatgccgtaaatacagcaaaagctttcaatgatattttaaat
ttcgatggtgtaattcttactaaattagatggagatacccgtggtggagcagcaatttct
attaaatcagtagtaaacaaacctattaaatttgtaggaactggcgaaaaaatggatgcg
attgatgttttctatccagagcgtatggcagagcgtattcttggtatgggcgatgttgtg
tcgcttgtagaaagagcgcaagagcaatacgatgaagaagaggctagaaaaattcaacga
aaaattgctaagaacgaatttggtttcgatgattttttatctcaaattcagcaagtaaaa
aaaatgggaaatatgaaagatcttgtaggcatgattcctggagcaggaaaagcactaaaa
gatgtagagattcaagacgatgctttcaaacatattgaagccataatatattcgatgaca
ccaaccgagagaagcaaaccagcaataatcgacgtgaagcgaaaagcaagaattgcaaaa
ggcgcaggaagaaaactagaagaagttaatcagctcatgaaacagtttgatcaaatgagt
aaaatgatgaaaataatgcaaggtccaggtgggaaaaatatgatgaaaatgatgggcgga
atgaaaggcggaatgccaggaatgaaataa
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